Gene
RNA
| Item | Value |
|---|---|
| gene id | G372685 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17016400 ~ 17016603 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein wntless homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU423699 | True | 204 | lncRNA | 0.40 | 1 | 17016400 | 17016603 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| st8sia5 | st8sia5 | coding | upstream | 4389 | 16995394 ~ 17012011 (+) |
| LOC110523342 | LOC106569363 | coding | upstream | 48591 | 16949402 ~ 16967809 (+) |
| purbb | LOC106562912 | coding | upstream | 272333 | 16741353 ~ 16744067 (+) |
| ved | LOC106569620 | coding | upstream | 281271 | 16732636 ~ 16735129 (+) |
| polm | LOC106569276 | coding | upstream | 290391 | 16712182 ~ 16726009 (+) |
| LOC110522812 | loxhd1 | coding | downstream | 2984 | 17019587 ~ 17071539 (+) |
| atp5fa1 | LOC106569424 | coding | downstream | 103184 | 17119787 ~ 17125777 (+) |
| LOC100136246 | LOC106569430 | coding | downstream | 109753 | 17126356 ~ 17147778 (+) |
| LOC110523352 | LOC106569472 | coding | downstream | 174813 | 17191416 ~ 17217186 (+) |
| LOC110523353 | LOC106569485 | coding | downstream | 219209 | 17235812 ~ 17242911 (+) |
| G372684 | NA | non-coding | upstream | 11331 | 17004384 ~ 17005069 (+) |
| G372683 | NA | non-coding | upstream | 17939 | 16997016 ~ 16998461 (+) |
| G372680 | NA | non-coding | upstream | 24471 | 16990812 ~ 16991929 (+) |
| G372676 | NA | non-coding | upstream | 29001 | 16987199 ~ 16987399 (+) |
| G372664 | NA | non-coding | upstream | 34255 | 16958997 ~ 16982145 (+) |
| G373068 | NA | non-coding | downstream | 18755 | 17035358 ~ 17037364 (+) |
| G373073 | NA | non-coding | downstream | 28411 | 17045014 ~ 17045237 (+) |
| G373090 | NA | non-coding | downstream | 52578 | 17069181 ~ 17069425 (+) |
| G373075 | NA | non-coding | downstream | 55029 | 17071632 ~ 17110493 (+) |
| G372618 | LOC105030512 | other | upstream | 134215 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 277900 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 795467 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1221278 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 1887583 | 15124290 ~ 15128817 (+) |
| G373726 | NA | other | downstream | 687510 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 1050840 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 2966658 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3574877 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 3726981 | 20508074 ~ 20759255 (+) |
