G373109


Basic Information

Item Value
gene id G373109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17112458 ~ 17112673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424199
aaagagagaattagaaagagcatacttaaattcacacaggacaccggataagacaggagaagtactcccgatataacaaactgaccctagccccccgacacaaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgatgatacccctggacagggccaaacaggaaggatataaccccacctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424199 True 216 lncRNA 0.50 1 17112458 17112673

Neighbor

gene id symbol gene type direction distance location
LOC110522812 loxhd1 coding upstream 40919 17019587 ~ 17071539 (+)
st8sia5 st8sia5 coding upstream 100447 16995394 ~ 17012011 (+)
LOC110523342 LOC106569363 coding upstream 144649 16949402 ~ 16967809 (+)
purbb LOC106562912 coding upstream 368391 16741353 ~ 16744067 (+)
ved LOC106569620 coding upstream 377329 16732636 ~ 16735129 (+)
atp5fa1 LOC106569424 coding downstream 7114 17119787 ~ 17125777 (+)
LOC100136246 LOC106569430 coding downstream 13683 17126356 ~ 17147778 (+)
LOC110523352 LOC106569472 coding downstream 78743 17191416 ~ 17217186 (+)
LOC110523353 LOC106569485 coding downstream 123139 17235812 ~ 17242911 (+)
tnpo1 LOC106569531 coding downstream 614848 17727521 ~ 17778710 (+)
G373075 NA non-coding upstream 1965 17071632 ~ 17110493 (+)
G373090 NA non-coding upstream 43033 17069181 ~ 17069425 (+)
G373073 NA non-coding upstream 67221 17045014 ~ 17045237 (+)
G373068 NA non-coding upstream 75094 17035358 ~ 17037364 (+)
G373125 NA non-coding downstream 36383 17149056 ~ 17149268 (+)
G373128 NA non-coding downstream 39272 17151945 ~ 17152244 (+)
G373132 NA non-coding downstream 45637 17158310 ~ 17158643 (+)
G373133 NA non-coding downstream 46033 17158706 ~ 17158963 (+)
G373135 NA non-coding downstream 48594 17161267 ~ 17161493 (+)
G372618 LOC105030512 other upstream 230273 16870434 ~ 16882185 (+)
G372373 NA other upstream 373958 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 891525 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1317336 15791559 ~ 15795122 (+)
G371182 NA other upstream 1983641 15124290 ~ 15128817 (+)
G373726 NA other downstream 591440 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 954770 18067350 ~ 18177035 (+)
G376320 NA other downstream 2870588 19983261 ~ 19983848 (+)
G377022 NA other downstream 3478807 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3630911 20508074 ~ 20759255 (+)

Expression


Co-expression Network