G373228 (LOC106569424)


Basic Information

Item Value
gene id G373228
gene name LOC106569424
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17124037 ~ 17125807 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424339
acgagagCCAGTCGAAAAAAGATCCATGGGTCCTGGAGTAGAAAGACTTTATTCTCTGTTAGGAGACATCTGTACAGTAATATCAAATGGCACTTTATTTTCAGATTTGTTTTTAAAGTTTAACATCCGCACTATGCAAACATTGACAAAATAGTTGACCAAAAATAAGACTACTCAAAGCTTGCCAGGAAGGTCAAGACGATCTGCTTAAGCTGGGCATCTGCGGTTTCTGAGATTTTGCCATCAGCTCTAATTTGTGCTAGGAGATCCTGGTGCTGGCTGAGAACATGTTGAAGAAAAGCCTTCTCAAACTTTGTGATCTTGGTTGGGTCCATTTTGTCCAAGTGTCCCCTCACACCAGCATAGATGACTGTAACCTGCTCCTCAATGGCCATGGGGCAGTACTGCCCCTGCTTGAGGAGCTCAGTAAGGCGAACACCACGGTTCAGAAGCTGCTGGGTGGCAGCGTCCAAGTCAGAACCAAACTGTGCGAAGGCAGCCACCTCACGGTACTGGGCCAGCTCCAGCTTCATGGTACCAGCCACCTGCTTCATGGCTTTGGTCTGGGCGGCAGAGCCGACACGTGACACAGACAGACCTACGTTGATGGCTGGTCGAATACCTTTGTAGAACAACTCAGTCTCCAAGAATATCTGTCCGTCTGTGATGGAGATGACATTGGTTGGAATGTAGGCGGAAACATCACCGGCCTGGGTCTCAATGACGGGCAGGGCGGTGAGGGAGCCGCCTCCGAAGTTTTCGTTCATCTTGGCTGCTCTCTCTAGCAAACGAGAATGGAGATAGAACACATCCCCGGGGTAGGCCTCACGACCGGGGGGACGACGTAGCAGCAGGGACATCTGACGGTAAGCC

Function

NR:

description
ATP synthase subunit alpha, mitochondrial isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424339 True 873 TUCP 0.50 5 17124037 17125807
Loading

Neighbor

gene id symbol gene type direction distance location
haus1 haus1 coding downstream 4096 17117368 ~ 17119941 (-)
LOC110523345 LOC106569410 coding downstream 14894 17092271 ~ 17109143 (-)
LOC110523346 rnf165 coding downstream 34000 17071595 ~ 17090037 (-)
LOC110523343 rl37 coding downstream 140534 16980916 ~ 16983503 (-)
LOC118964776 NA coding downstream 141702 16982257 ~ 16982335 (-)
hwa LOC106569438 coding upstream 22041 17147848 ~ 17150076 (-)
LOC110523350 LOC106569446 coding upstream 27657 17153464 ~ 17158078 (-)
LOC110523351 LOC106569451 coding upstream 35936 17161638 ~ 17179125 (-)
LOC110523354 LOC106569496 coding upstream 360089 17483696 ~ 17521507 (-)
nbc nbc coding upstream 473101 17598908 ~ 17688319 (-)
G373226 NA non-coding downstream 8501 17115322 ~ 17115536 (-)
G373225 NA non-coding downstream 8904 17114906 ~ 17115133 (-)
G373216 NA non-coding downstream 54022 17069630 ~ 17070015 (-)
G373213 NA non-coding downstream 60369 17063409 ~ 17063668 (-)
G373240 NA non-coding upstream 25845 17151652 ~ 17151923 (-)
G373285 NA non-coding upstream 105858 17231665 ~ 17231914 (-)
G373286 NA non-coding upstream 107604 17233411 ~ 17233628 (-)
G373288 NA non-coding upstream 109216 17235023 ~ 17235225 (-)
LOC110523341 LOC106569324 other downstream 181846 16909582 ~ 16942359 (-)
G372123 NA other downstream 1142822 15978502 ~ 15981215 (-)
G372122 NA other downstream 1147921 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 1425708 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1999248 15123475 ~ 15124789 (-)
G374189 NA other upstream 877013 18002820 ~ 18003170 (-)
G374786 NA other upstream 1432333 18558140 ~ 18559167 (-)
G377800 NA other upstream 3568289 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 3578806 20704613 ~ 20705140 (-)

Expression

G373228(LOC106569424) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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G373228(LOC106569424) Expression in each Bioproject

Bar chart with 16 bars.
G373228(LOC106569424) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
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Co-expression Network