G373128



Basic Information


Item Value
gene id G373128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17151945 ~ 17152244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU424218
cctggttcctctctaggtttcttcctaggttccagactttctagggagttttttctagccactgtgctgtttgaggttttaggcccGGTTTCCGTACAGCACTTtatgacattggctgatgtaaaaagggctttataaataaattgattgattccaggtgaagctggttgagtgaatgccaagtgtgtgcaaagctgccatcaaggcaaagggtggctactttgaagaatctaaaatatattttgatttgtttaacacttttggttattacatgattccatgcgtTATTTATTCGTTTTC

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU424218 True 300 lncRNA 0.39 1 17151945 17152244

Neighbor


gene id symbol gene type direction distance location
LOC100136246 LOC106569430 coding upstream 4167 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 26168 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 80406 17019587 ~ 17071539 (+)
st8sia5 st8sia5 coding upstream 139934 16995394 ~ 17012011 (+)
LOC110523342 LOC106569363 coding upstream 184136 16949402 ~ 16967809 (+)
LOC110523352 LOC106569472 coding downstream 39172 17191416 ~ 17217186 (+)
LOC110523353 LOC106569485 coding downstream 83568 17235812 ~ 17242911 (+)
tnpo1 LOC106569531 coding downstream 575277 17727521 ~ 17778710 (+)
LOC110523357 LOC106569536 coding downstream 639616 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 725373 17877617 ~ 17879225 (+)
G373125 NA non-coding upstream 2677 17149056 ~ 17149268 (+)
G373109 NA non-coding upstream 39272 17112458 ~ 17112673 (+)
G373075 NA non-coding upstream 41452 17071632 ~ 17110493 (+)
G373090 NA non-coding upstream 82520 17069181 ~ 17069425 (+)
G373132 NA non-coding downstream 6066 17158310 ~ 17158643 (+)
G373133 NA non-coding downstream 6462 17158706 ~ 17158963 (+)
G373135 NA non-coding downstream 9023 17161267 ~ 17161493 (+)
G373137 NA non-coding downstream 9376 17161620 ~ 17162058 (+)
G373143 NA non-coding downstream 19156 17171400 ~ 17171617 (+)
G372618 LOC105030512 other upstream 269760 16870434 ~ 16882185 (+)
G372373 NA other upstream 413445 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 931012 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1356823 15791559 ~ 15795122 (+)
G371182 NA other upstream 2023128 15124290 ~ 15128817 (+)
G373726 NA other downstream 551869 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 915199 18067350 ~ 18177035 (+)
G376320 NA other downstream 2831017 19983261 ~ 19983848 (+)
G377022 NA other downstream 3439236 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3591340 20508074 ~ 20759255 (+)

Expression



Co-expression Network