G373137


Basic Information

Item Value
gene id G373137
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17161620 ~ 17162058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424227
gaattcaccacaggtgttTATTTTTAACCACcggtttttattttaaatacattttctaaaaataaaaaataaactgtttttgctttgtcattatgtggtatagattgctgaggatttaattttcaatgtggaaaaagtcaaggggtctgaatactttctaaaggcactgtatatcatgaCCCATGGCTAATGAGAAACTGAAAGCATGAATATGAATGACAATATCCCATGAGTTAATCGTTCTTCCTCTGATCAAAGTGTTTGACCTATGACAGATTAACAGATTATGGTGGGTGGCAGTGTGTGTGGTAAGTGCGATCCTTCACAGTCCAGTCCACCACCTTCCCCTATGTGGGAGTAGTAGGTGCTGCTGAGTCACATTGTGCTCTCAGCATTCACAAAGGACAGTGCATTCCCAAAGTAAGTGACACTAACCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424227 True 439 lncRNA 0.39 1 17161620 17162058

Neighbor

gene id symbol gene type direction distance location
LOC100136246 LOC106569430 coding upstream 13842 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 35843 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 90081 17019587 ~ 17071539 (+)
st8sia5 st8sia5 coding upstream 149609 16995394 ~ 17012011 (+)
LOC110523342 LOC106569363 coding upstream 193811 16949402 ~ 16967809 (+)
LOC110523352 LOC106569472 coding downstream 29358 17191416 ~ 17217186 (+)
LOC110523353 LOC106569485 coding downstream 73754 17235812 ~ 17242911 (+)
tnpo1 LOC106569531 coding downstream 565463 17727521 ~ 17778710 (+)
LOC110523357 LOC106569536 coding downstream 629802 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 715559 17877617 ~ 17879225 (+)
G373135 NA non-coding upstream 127 17161267 ~ 17161493 (+)
G373133 NA non-coding upstream 2657 17158706 ~ 17158963 (+)
G373132 NA non-coding upstream 2977 17158310 ~ 17158643 (+)
G373128 NA non-coding upstream 9376 17151945 ~ 17152244 (+)
G373125 NA non-coding upstream 12352 17149056 ~ 17149268 (+)
G373143 NA non-coding downstream 9342 17171400 ~ 17171617 (+)
G373144 NA non-coding downstream 10295 17172353 ~ 17230280 (+)
G373157 NA non-coding downstream 74711 17236769 ~ 17237405 (+)
G373293 NA non-coding downstream 83327 17245385 ~ 17245802 (+)
G373294 NA non-coding downstream 83854 17245912 ~ 17246427 (+)
G372618 LOC105030512 other upstream 279435 16870434 ~ 16882185 (+)
G372373 NA other upstream 423120 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 940687 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1366498 15791559 ~ 15795122 (+)
G371182 NA other upstream 2032803 15124290 ~ 15128817 (+)
G373726 NA other downstream 542055 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 905385 18067350 ~ 18177035 (+)
G376320 NA other downstream 2821203 19983261 ~ 19983848 (+)
G377022 NA other downstream 3429422 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3581526 20508074 ~ 20759255 (+)

Expression


Co-expression Network