Gene
RNA
| Item | Value |
|---|---|
| gene id | G373144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17172353 ~ 17230280 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424234 | True | 456 | lncRNA | 0.47 | 2 | 17172353 | 17230280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136246 | LOC106569430 | coding | upstream | 24575 | 17126356 ~ 17147778 (+) |
| atp5fa1 | LOC106569424 | coding | upstream | 46576 | 17119787 ~ 17125777 (+) |
| LOC110522812 | loxhd1 | coding | upstream | 100814 | 17019587 ~ 17071539 (+) |
| st8sia5 | st8sia5 | coding | upstream | 160342 | 16995394 ~ 17012011 (+) |
| LOC110523342 | LOC106569363 | coding | upstream | 204544 | 16949402 ~ 16967809 (+) |
| LOC110523353 | LOC106569485 | coding | downstream | 5532 | 17235812 ~ 17242911 (+) |
| tnpo1 | LOC106569531 | coding | downstream | 497241 | 17727521 ~ 17778710 (+) |
| LOC110523357 | LOC106569536 | coding | downstream | 561580 | 17791860 ~ 17871592 (+) |
| LOC110523359 | LOC106569632 | coding | downstream | 647337 | 17877617 ~ 17879225 (+) |
| tmem174 | LOC106569163 | coding | downstream | 670213 | 17900493 ~ 17930164 (+) |
| G373143 | NA | non-coding | upstream | 736 | 17171400 ~ 17171617 (+) |
| G373137 | NA | non-coding | upstream | 10295 | 17161620 ~ 17162058 (+) |
| G373135 | NA | non-coding | upstream | 10860 | 17161267 ~ 17161493 (+) |
| G373133 | NA | non-coding | upstream | 13390 | 17158706 ~ 17158963 (+) |
| G373132 | NA | non-coding | upstream | 13710 | 17158310 ~ 17158643 (+) |
| G373157 | NA | non-coding | downstream | 6489 | 17236769 ~ 17237405 (+) |
| G373293 | NA | non-coding | downstream | 15105 | 17245385 ~ 17245802 (+) |
| G373294 | NA | non-coding | downstream | 15632 | 17245912 ~ 17246427 (+) |
| G373317 | NA | non-coding | downstream | 34886 | 17265166 ~ 17265396 (+) |
| G373353 | NA | non-coding | downstream | 60255 | 17290535 ~ 17290797 (+) |
| G372618 | LOC105030512 | other | upstream | 290168 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 433853 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 951420 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1377231 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 2043536 | 15124290 ~ 15128817 (+) |
| G373726 | NA | other | downstream | 473833 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 837163 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 2752981 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3361200 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 3513304 | 20508074 ~ 20759255 (+) |
