Gene
RNA
| Item | Value |
|---|---|
| gene id | G373157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17236769 ~ 17237405 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424248 | True | 589 | lncRNA | 0.41 | 2 | 17236769 | 17237405 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523352 | LOC106569472 | coding | upstream | 19583 | 17191416 ~ 17217186 (+) |
| LOC100136246 | LOC106569430 | coding | upstream | 88991 | 17126356 ~ 17147778 (+) |
| atp5fa1 | LOC106569424 | coding | upstream | 110992 | 17119787 ~ 17125777 (+) |
| LOC110522812 | loxhd1 | coding | upstream | 165230 | 17019587 ~ 17071539 (+) |
| st8sia5 | st8sia5 | coding | upstream | 224758 | 16995394 ~ 17012011 (+) |
| tnpo1 | LOC106569531 | coding | downstream | 490116 | 17727521 ~ 17778710 (+) |
| LOC110523357 | LOC106569536 | coding | downstream | 554455 | 17791860 ~ 17871592 (+) |
| LOC110523359 | LOC106569632 | coding | downstream | 640212 | 17877617 ~ 17879225 (+) |
| tmem174 | LOC106569163 | coding | downstream | 663088 | 17900493 ~ 17930164 (+) |
| btf3 | btf3 | coding | downstream | 803298 | 18040703 ~ 18047631 (+) |
| G373144 | NA | non-coding | upstream | 6489 | 17172353 ~ 17230280 (+) |
| G373143 | NA | non-coding | upstream | 65152 | 17171400 ~ 17171617 (+) |
| G373137 | NA | non-coding | upstream | 74711 | 17161620 ~ 17162058 (+) |
| G373135 | NA | non-coding | upstream | 75276 | 17161267 ~ 17161493 (+) |
| G373133 | NA | non-coding | upstream | 77806 | 17158706 ~ 17158963 (+) |
| G373293 | NA | non-coding | downstream | 7980 | 17245385 ~ 17245802 (+) |
| G373294 | NA | non-coding | downstream | 8507 | 17245912 ~ 17246427 (+) |
| G373317 | NA | non-coding | downstream | 27761 | 17265166 ~ 17265396 (+) |
| G373353 | NA | non-coding | downstream | 53130 | 17290535 ~ 17290797 (+) |
| G373364 | NA | non-coding | downstream | 61558 | 17298963 ~ 17299314 (+) |
| G372618 | LOC105030512 | other | upstream | 354584 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 498269 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 1015836 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1441647 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 2107952 | 15124290 ~ 15128817 (+) |
| G373726 | NA | other | downstream | 466708 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 830038 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 2745856 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3354075 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 3506179 | 20508074 ~ 20759255 (+) |
