Gene
RNA
| Item | Value |
|---|---|
| gene id | G373424 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17347645 ~ 17347862 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424547 | True | 218 | lncRNA | 0.45 | 1 | 17347645 | 17347862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523353 | LOC106569485 | coding | upstream | 104734 | 17235812 ~ 17242911 (+) |
| LOC110523352 | LOC106569472 | coding | upstream | 130459 | 17191416 ~ 17217186 (+) |
| LOC100136246 | LOC106569430 | coding | upstream | 199867 | 17126356 ~ 17147778 (+) |
| atp5fa1 | LOC106569424 | coding | upstream | 221868 | 17119787 ~ 17125777 (+) |
| LOC110522812 | loxhd1 | coding | upstream | 276106 | 17019587 ~ 17071539 (+) |
| tnpo1 | LOC106569531 | coding | downstream | 379659 | 17727521 ~ 17778710 (+) |
| LOC110523357 | LOC106569536 | coding | downstream | 443998 | 17791860 ~ 17871592 (+) |
| LOC110523359 | LOC106569632 | coding | downstream | 529755 | 17877617 ~ 17879225 (+) |
| tmem174 | LOC106569163 | coding | downstream | 552631 | 17900493 ~ 17930164 (+) |
| btf3 | btf3 | coding | downstream | 692841 | 18040703 ~ 18047631 (+) |
| G373412 | NA | non-coding | upstream | 7287 | 17340097 ~ 17340358 (+) |
| G373387 | NA | non-coding | upstream | 17869 | 17329605 ~ 17329776 (+) |
| G373364 | NA | non-coding | upstream | 48331 | 17298963 ~ 17299314 (+) |
| G373353 | NA | non-coding | upstream | 56848 | 17290535 ~ 17290797 (+) |
| G373317 | NA | non-coding | upstream | 82249 | 17265166 ~ 17265396 (+) |
| G373435 | NA | non-coding | downstream | 15760 | 17363622 ~ 17367115 (+) |
| G373438 | NA | non-coding | downstream | 19756 | 17367618 ~ 17367937 (+) |
| G373499 | NA | non-coding | downstream | 65252 | 17413114 ~ 17413333 (+) |
| G373506 | NA | non-coding | downstream | 72625 | 17420487 ~ 17427479 (+) |
| G373517 | NA | non-coding | downstream | 91359 | 17439221 ~ 17439730 (+) |
| G372618 | LOC105030512 | other | upstream | 465460 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 609145 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 1126712 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1552523 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 2218828 | 15124290 ~ 15128817 (+) |
| G373726 | NA | other | downstream | 356251 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 719581 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 2635399 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3243618 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 3395722 | 20508074 ~ 20759255 (+) |
