Gene
RNA
| Item | Value |
|---|---|
| gene id | G373499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17413114 ~ 17413333 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424627 | True | 220 | lncRNA | 0.41 | 1 | 17413114 | 17413333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523353 | LOC106569485 | coding | upstream | 170203 | 17235812 ~ 17242911 (+) |
| LOC110523352 | LOC106569472 | coding | upstream | 195928 | 17191416 ~ 17217186 (+) |
| LOC100136246 | LOC106569430 | coding | upstream | 265336 | 17126356 ~ 17147778 (+) |
| atp5fa1 | LOC106569424 | coding | upstream | 287337 | 17119787 ~ 17125777 (+) |
| LOC110522812 | loxhd1 | coding | upstream | 341575 | 17019587 ~ 17071539 (+) |
| tnpo1 | LOC106569531 | coding | downstream | 314188 | 17727521 ~ 17778710 (+) |
| LOC110523357 | LOC106569536 | coding | downstream | 378527 | 17791860 ~ 17871592 (+) |
| LOC110523359 | LOC106569632 | coding | downstream | 464284 | 17877617 ~ 17879225 (+) |
| tmem174 | LOC106569163 | coding | downstream | 487160 | 17900493 ~ 17930164 (+) |
| btf3 | btf3 | coding | downstream | 627370 | 18040703 ~ 18047631 (+) |
| G373438 | NA | non-coding | upstream | 45177 | 17367618 ~ 17367937 (+) |
| G373435 | NA | non-coding | upstream | 45999 | 17363622 ~ 17367115 (+) |
| G373424 | NA | non-coding | upstream | 65252 | 17347645 ~ 17347862 (+) |
| G373412 | NA | non-coding | upstream | 72756 | 17340097 ~ 17340358 (+) |
| G373387 | NA | non-coding | upstream | 83338 | 17329605 ~ 17329776 (+) |
| G373506 | NA | non-coding | downstream | 7154 | 17420487 ~ 17427479 (+) |
| G373517 | NA | non-coding | downstream | 25888 | 17439221 ~ 17439730 (+) |
| G373542 | NA | non-coding | downstream | 70372 | 17483705 ~ 17487049 (+) |
| G373625 | NA | non-coding | downstream | 130051 | 17543384 ~ 17543713 (+) |
| G373644 | NA | non-coding | downstream | 142254 | 17555587 ~ 17556039 (+) |
| G372618 | LOC105030512 | other | upstream | 530929 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 674614 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 1192181 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 1617992 | 15791559 ~ 15795122 (+) |
| G371182 | NA | other | upstream | 2284297 | 15124290 ~ 15128817 (+) |
| G373726 | NA | other | downstream | 290780 | 17704113 ~ 17707757 (+) |
| arhgef28a | LOC106568988 | other | downstream | 654110 | 18067350 ~ 18177035 (+) |
| G376320 | NA | other | downstream | 2569928 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 3178147 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 3330251 | 20508074 ~ 20759255 (+) |
