G373517



Basic Information


Item Value
gene id G373517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17439221 ~ 17439730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU424645
ttgttattctgcacaccactaactctacctgttgttcttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttgttcttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttgttcttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttgttcttattctgcacaccactaactctacctgttgttgttattctgcacaccactatctctacctgttgttgttattctgcacaccactaactctacctgttgttgttattctgcacaccactaactctacctgttATTATTATTTTGCACACCACTAtctctacctgttgttgttattctgcacaccactaactctacctgttg

Function


NR:

description
PREDICTED: uncharacterized protein LOC106533784 isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU424645 True 510 lncRNA 0.41 1 17439221 17439730

Neighbor


gene id symbol gene type direction distance location
LOC110523353 LOC106569485 coding upstream 196310 17235812 ~ 17242911 (+)
LOC110523352 LOC106569472 coding upstream 222035 17191416 ~ 17217186 (+)
LOC100136246 LOC106569430 coding upstream 291443 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 313444 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 367682 17019587 ~ 17071539 (+)
tnpo1 LOC106569531 coding downstream 287791 17727521 ~ 17778710 (+)
LOC110523357 LOC106569536 coding downstream 352130 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 437887 17877617 ~ 17879225 (+)
tmem174 LOC106569163 coding downstream 460763 17900493 ~ 17930164 (+)
btf3 btf3 coding downstream 600973 18040703 ~ 18047631 (+)
G373506 NA non-coding upstream 11742 17420487 ~ 17427479 (+)
G373499 NA non-coding upstream 25888 17413114 ~ 17413333 (+)
G373438 NA non-coding upstream 71284 17367618 ~ 17367937 (+)
G373435 NA non-coding upstream 72106 17363622 ~ 17367115 (+)
G373424 NA non-coding upstream 91359 17347645 ~ 17347862 (+)
G373542 NA non-coding downstream 43975 17483705 ~ 17487049 (+)
G373625 NA non-coding downstream 103654 17543384 ~ 17543713 (+)
G373644 NA non-coding downstream 115857 17555587 ~ 17556039 (+)
G373674 NA non-coding downstream 141237 17580967 ~ 17581198 (+)
G373691 NA non-coding downstream 159193 17598923 ~ 17602356 (+)
G372618 LOC105030512 other upstream 557036 16870434 ~ 16882185 (+)
G372373 NA other upstream 700721 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1218288 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1644099 15791559 ~ 15795122 (+)
G371182 NA other upstream 2310404 15124290 ~ 15128817 (+)
G373726 NA other downstream 264383 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 627713 18067350 ~ 18177035 (+)
G376320 NA other downstream 2543531 19983261 ~ 19983848 (+)
G377022 NA other downstream 3151750 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3303854 20508074 ~ 20759255 (+)

Expression



Co-expression Network