G373625


Basic Information

Item Value
gene id G373625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17543384 ~ 17543713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424779
TTACAGAGGAGCTTGCTTCAGcacagtcaatgaagagcacaaccacagGGAAAGATTTATTTGAGGAGGTTATTAATAAGTgtggcaaagctgggactgagttttgaaaagttatcCAGTGTGACCACTGATGGGTGCCCAAACTTCACAGGAAAAAACGTTGGCCCTTTAAAAAGGATACAAGATCAAGtagctgagctgaacccagatcaTAAAATTATTTTCCGGCATTGCATTATTCATCAAGAGgtgctctgtaaatgtgttctgaaaatgagccatgttgtggatacagtcactaaagtggtaaacttcataagagcaaaatct

Function

NR:

description
PREDICTED: general transcription factor II-I repeat domain-containing protein 2B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424779 True 330 lncRNA 0.40 1 17543384 17543713

Neighbor

gene id symbol gene type direction distance location
LOC110523353 LOC106569485 coding upstream 300473 17235812 ~ 17242911 (+)
LOC110523352 LOC106569472 coding upstream 326198 17191416 ~ 17217186 (+)
LOC100136246 LOC106569430 coding upstream 395606 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 417607 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 471845 17019587 ~ 17071539 (+)
tnpo1 LOC106569531 coding downstream 183808 17727521 ~ 17778710 (+)
LOC110523357 LOC106569536 coding downstream 248147 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 333904 17877617 ~ 17879225 (+)
tmem174 LOC106569163 coding downstream 356780 17900493 ~ 17930164 (+)
btf3 btf3 coding downstream 496990 18040703 ~ 18047631 (+)
G373542 NA non-coding upstream 56335 17483705 ~ 17487049 (+)
G373517 NA non-coding upstream 103654 17439221 ~ 17439730 (+)
G373506 NA non-coding upstream 115905 17420487 ~ 17427479 (+)
G373499 NA non-coding upstream 130051 17413114 ~ 17413333 (+)
G373438 NA non-coding upstream 175447 17367618 ~ 17367937 (+)
G373644 NA non-coding downstream 11874 17555587 ~ 17556039 (+)
G373674 NA non-coding downstream 37254 17580967 ~ 17581198 (+)
G373691 NA non-coding downstream 55210 17598923 ~ 17602356 (+)
G373732 NA non-coding downstream 100332 17644045 ~ 17645733 (+)
G373725 NA non-coding downstream 170939 17714652 ~ 17717041 (+)
G372618 LOC105030512 other upstream 661199 16870434 ~ 16882185 (+)
G372373 NA other upstream 804884 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1322451 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1748262 15791559 ~ 15795122 (+)
G371182 NA other upstream 2414567 15124290 ~ 15128817 (+)
G373726 NA other downstream 160400 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 523730 18067350 ~ 18177035 (+)
G376320 NA other downstream 2439548 19983261 ~ 19983848 (+)
G377022 NA other downstream 3047767 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3199871 20508074 ~ 20759255 (+)

Expression


Co-expression Network