G373691


Basic Information

Item Value
gene id G373691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17598923 ~ 17602356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424848
CTTTATTGCTGTCAATATGCATGTCATTTGAAAAATATGCCAAATAACTCACTTTAAGTAACATACTCATTCAAAAATAGTCTATACCAATTATTAATGAAATACCATAAATCTTACAGGTATTCATTTATCTTAAAGTATAGTTTTATTGCTTGGATATTTTGTTCTACGTTTTACAATAAACTGACACTTGTATCTCAGTGCTTGTGCTTGTTAAATATGAACCATGTTTGTAGATAAAGATTCTCAAATGTGTCAACTTTATTAAAAAGAAAAGTTGATCAAATTAGCCCCCAATGAATCAACACATTTTACAGCAAAAACATGGACTAATCCTAAACTTAGAAACCTAGAAAATGAATATGCTGTCAAGATATACAGACAACTAACATTTGCCCCAGGACAGATCAAGATGGGAGCTGGCATATTTGGGATAGAAAACATGACATCAATAGGGACCATGATTAAGAGTGTACCATCATTTTGACATTCATCACAGTTCTATCATACTTCAGATACACTTACAATACAATATTGTTTTTGACATTATACCACGCAAGATTACAAATATAATTGTATTATATTAACGCTGCAGTATATTAGCTTTCATACACTCCTGTAAGAGTAGCATGAAGATAACAGCATAGATAAGAATCACAGTGAGTTTTGATTCATCTCATTTAATTGGCTGAGATGAATGCTTGAAGATGTTACAATTTAAATAATTTACAAACCCAGTAATCAATAAGACCACATAACCAAAAGCTCTATCTTCAAGCCACTTAGAAACTGCAATTAGTCCAAATGCAGTAAATAATTTAAGCCTACATTTCTACAAGGGCTGCAATGCATCTGTGAGAGCTGGCAACCGAGAAAGCTGGCAACCGAGAAAGCTGGCTGGTGGAGGAGATTAAATGTTGAATGGTTGTGAATGAATATTTGGTCATGGAACTTTGAAAAGCTGTACACTATATGCAACATTAGTTCTTGCAGAAATGCAAGACAAGTAACTTCAATATTGCATTGTCTCACTGATTCTTCAATGATATCGTAGATCATAATATTATTTAATATCCTTAAAAAACACTTACTAAATGATCACTTCATTAAAAAAGGTAATAATAAAAATGTTGCCCCACAGACAACTGGAAAAATTGTCATattgtaaatacatgtaattatTATTTCACTTAATCTCTCAGCGATATAATATGCGTCACTGTTATTGcatttatttaaatgtgatacAAATAAAAATCTCGAATTAATTAGTTACAGAGCAAAAGAAACTCAGAAAATGATAAGGTAGAGATCCTGTGCTGTGCCCTTTCATGCAAATAATTCAGTATTAATGATGACAAATCATTACATAATAATAATGGGTTCATCATACTGTACTTATAATGCCTGGCACCTACAGTACATTAATTAAGTCAAAGAGGTAGAGCTACAAATaagtatatttatatatttcaatCCCTACTACAGATAATCGTAGTTGGTGTCCTCCTGTCTCTTATTAAGCCGATAGGAACAACAGACGAGGGTTAATTCCACAAATTCAATTATAATTCCAGGTCAGTCGTTGAATTAAGAGATAATTAATTTCCTCTGAATTCCAATGTTAGGTCAATTAAAATATTTTAATTCCCAATTGAAATGATCCCCAACAATTCCCTCAGGCTTTAAGGCTGATGTCAGTGTTCAGATAGCCAAGTTATActagaaatatagaaatacaagTTTAAATGATTTAAAACAAATCCTGCAGTCGATTTGACACTTTTTGCATTAATTATATTACCTGGgaaatatacaaatattgaaTTGCAATTCAATTCAAAAAACATTTTCTTTTCAATTCCAATTCAAACAGTAtaattccaattcaattccaaAACTTTAAAATTCTTTAAATTAGAATGTAATTCAGTCAGAAATTCTCCACTTCATGAGTGATTTCAAGAATTGAATTAGAAATTCTAATGACATTGCAATTGACCTCAACCCTGCAACAAACATAACTAATAGAACAGACCAATCAGAAAAGTTTATCAGTTTCATACACACTGGGAAGGAAAATAGCCAAACCAACATTTTGGTTCAAgagcaaaaaatatttagcatatATAAATACGACAATACAGGTGTGAAGGACAGAAACACATGAAATCCAAAAAGGACACTATGATGATGGACAGTTGAACATGAAATGATAATGGGATTTTTAAGTTTGATCTGTTCTGGCAGGCATAGAATAGGACAGTCAAGTCCAACTTCACAGCTCCATAAGAGTTGCATAATAAAGTGTGTTGTACTTAATTACCTAACAGGCATGAATTATGAATACATGAAGCATTGTATTAGTTTAAATGCTTTATAAATCATTAATACCATACCCATGAATAAGCAATGAATGGCTTCCAAAGAACTTCAACGTTTTCCTTGGTGTAGAGCATGACCTCTACAGCAAATTAAGGATTTTCAAATGCAACCCCTACCCCTCTCATACAAACACTTACATCTCCCCGTTTCACAAGGCTCCCTCCTATACTTCTCTTCTCAAAACAAAGAATTCTGTCAGTTATCTTAAATTAAAAATATGTACTTCAGCAGGACATTTAAAAGAGAATTATAAAACAGTGCTACAGTATAAATGAGGCTGCTGTAGGGGTCTTTGTTTACATCCAACATGGCATCTCATTCcttacatagggctctggtcaaaagtagtgcactaagaggacaagagtagtgcactatatagggaatagggtgcaatttcagATGCACTTTGTGCTGTGTTGATTAGTGCTGGTTTTGTTGGGTTGTTTGTGTTAGACTAGAGGGACATTTCAGATCCCAGAGACTAGTTTTTCCAGAAGAAACCGTTGTCTTCTGGCTCCAGGTCGATTCTAATCTGAGGCACAGCTTTTTTTC
>TU424849
CTTTATTGCTGTCAATATGCATGTCATTTGAAAAATATGCCAAATAACTCACTTTAAGTAACATACTCATTCAAAAATAGTCTATACCAATTATTAATGAAATACCATAAATCTTACAGGTATTCATTTATCTTAAAGTATAGTTTTATTGCTTGGATATTTTGTTCTACGTTTTACAATAAACTGACACTTGTATCTCAGTGCTTGTGCTTGTTAAATATGAACCATGTTTGTAGATAAAGATTCTCAAATGTGTCAACTTTATTAAAAAGAAAAGTTGATCAAATTAGCCCCCAATGAATCAACACATTTTACAGCAAAAACATGGACTAATCCTAAACTTAGAAACCTAGAAAATGAATATGCTGTCAAGATATACAGACAACTAACATTTGCCCCAGGACAGATCAAGATGGGAGCTGGCATATTTGGGATAGAAAACATGACATCAATAGGGACCATGATTAAGAGTGTACCATCATTTTGACATTCATCACAGTTCTATCATACTTCAGATACACTTACAATACAATATTGTTTTTGACATTATACCACGCAAGATTACAAATATAATTGTATTATATTAACGCTGCAGTATATTAGCTTTCATACACTCCTGTAAGAGTAGCATGAAGATAACAGCATAGATAAGAATCACAGTGAGTTTTGATTCATCTCATTTAATTGGCTGAGATGAATGCTTGAAGATGTTACAATTTAAATAATTTACAAACCCAGTAATCAATAAGACCACATAACCAAAAGCTCTATCTTCAAGCCACTTAGAAACTGCAATTAGTCCAAATGCAGTAAATAATTTAAGCCTACATTTCTACAAGGGCTGCAATGCATCTGTGAGAGCTGGCAACCGAGAAAGCTGGCAACCGAGAAAGCTGGCTGGTGGAGGAGATTAAATGTTGAATGGTTGTGAATGAATATTTGGTCATGGAACTTTGAAAAGCTGTACACTATATGCAACATTAGTTCTTGCAGAAATGCAAGACAAGTAACTTCAATATTGCATTGTCTCACTGATTCTTCAATGATATCGTAGATCATAATATTATTTAATATCCTTAAAAAACACTTACTAAATGATCACTTCATTAAAAAAGGTAATAATAAAAATGTTGCCCCACAGACAACTGGAAAAATTGTCATattgtaaatacatgtaattatTATTTCACTTAATCTCTCAGCGATATAATATGCGTCACTGTTATTGcatttatttaaatgtgatacAAATAAAAATCTCGAATTAATTAGTTACAGAGCAAAAGAAACTCAGAAAATGATAAGGTAGAGATCCTGTGCTGTGCCCTTTCATGCAAATAATTCAGTATTAATGATGACAAATCATTACATAATAATAATGGGTTCATCATACTGTACTTATAATGCCTGGCACCTACAGTACATTAATTAAGTCAAAGAGGTAGAGCTACAAATaagtatatttatatatttcaatCCCTACTACAGATAATCGTAGTTGGTGTCCTCCTGTCTCTTATTAAGCCGATAGGAACAACAGACGAGGGTTAATTCCACAAATTCAATTATAATTCCAGGTCAGTCGTTGAATTAAGAGATAATTAATTTCCTCTGAATTCCAATGTTAGGTCAATTAAAATATTTTAATTCCCAATTGAAATGATCCCCAACAATTCCCTCAGGCTTTAAGGCTGATGTCAGTGTTCAGATAGCCAAGTTATActagaaatatagaaatacaagTTTAAATGATTTAAAACAAATCCTGCAGTCGATTTGACACTTTTTGCATTAATTATATTACCTGGgaaatatacaaatattgaaTTGCAATTCAATTCAAAAAACATTTTCTTTTCAATTCCAATTCAAACAGTAtaattccaattcaattccaaAACTTTAAAATTCTTTAAATTAGAATGTAATTCAGTCAGAAATTCTCCACTTCATGAGTGATTTCAAGAATTGAATTAGAAATTCTAATGACATTGCAATTGACCTCAACCCTGCAACAAACATAACTAATAGAACAGACCAATCAGAAAAGTTTATCAGTTTCATACACACTGGGAAGGAAAATAGCCAAACCAACATTTTGGTTCAAgagcaaaaaatatttagcatatATAAATACGACAATACAGGTGTGAAGGACAGAAACACATGAAATCCAAAAAGGACACTATGATGATGGACAGTTGAACATGAAATGATAATGGGATTTTTAAGTTTGATCTGTTCTGGCAGGCATAGAATAGGACAGTCAAGTCCAACTTCACAGCTCCATAAGAGTTGCATAATAAAGTGTGTTGTACTTAATTACCTAACAGGCATGAATTATGAATACATGAAGCATTGTATTAGTTTAAATGCTTTATAAATCATTAATACCATACCCATGAATAAGCAATGAATGGCTTCCAAAGAACTTCAACGTTTTCCTTGGTGTAGAGCATGACCTCTACAGCAAATTAAGGATTTTCAAATGCAACCCCTACCCCTCTCATACAAACACTTACATCTCCCCGTTTCACAAGGCTCCCTCCTATACTTCTCTTCTCAAAACAAAGAATTCTGTCAGTTATCTTAAATTAAAAATATGTACTTCAGCAGGACATTTAAAAGAGAATTATAAAACAGTGCTACAGTATAAATGAGGCTGCTGTAGGGGTCTTTGTTTACATCCAACATGGCATCTCATTCcttacatagggctctggtcaaaagtagtgcactaagaggacaagagtagtgcactatatagggaatagggtgcaatttcagATGCACTTTGTGCTGTGTTGATTAGTGCTGGTTTTGTTGGGTTGTTTGTGTTAGACTAGAGGGACATTTCAGATCCCAGAGACTAGTTTTTCCAGAAGAAACCGTTGTCTTCTGGCTCCAGGTCGATTCTAATCTGAGGCACAGCTTTTTTTCAATAGATTCAGactgagagatagaaagagaggagagggataaagagcgagagagtgagagagagaggagacagagagaaggtagagagattGAACAACCATGACACGCTATACTCTGACTGATTGTCACACTATATAAATCTGTGGGTGTCTGGGGGTATAGAATAAGTCACACAGGCTCGCTCACACAGATACCTTGCTACAGTAGTGGGCTCAAAGTAGTCCTCAACATGGTGAGTGTTGGTCACGGAAAGACGACGGGGGTCCTAAAAGagaagacaaaacacacacaacattaaCAAGTTTCAGCCACTTAAATATTCACTCTCAAAATATCATCATAATTCAGACCAGGTCCAGCAAAAGAGGAACATTTGAGCAAGCGTTGCAAAGCCATGATGTTTCACAGTAGAAGCAGCTGTTAATTAAGCATTTGTAAGCAGCTGTTAATTAAGCATTTATAAGCAGCTGTTAA
>TU424850
CTTTATTGCTGTCAATATGCATGTCATTTGAAAAATATGCCAAATAACTCACTTTAAGTAACATACTCATTCAAAAATAGTCTATACCAATTATTAATGAAATACCATAAATCTTACAGGTATTCATTTATCTTAAAGTATAGTTTTATTGCTTGGATATTTTGTTCTACGTTTTACAATAAACTGACACTTGTATCTCAGTGCTTGTGCTTGTTAAATATGAACCATGTTTGTAGATAAAGATTCTCAAATGTGTCAACTTTATTAAAAAGAAAAGTTGATCAAATTAGCCCCCAATGAATCAACACATTTTACAGCAAAAACATGGACTAATCCTAAACTTAGAAACCTAGAAAATGAATATGCTGTCAAGATATACAGACAACTAACATTTGCCCCAGGACAGATCAAGATGGGAGCTGGCATATTTGGGATAGAAAACATGACATCAATAGGGACCATGATTAAGAGTGTACCATCATTTTGACATTCATCACAGTTCTATCATACTTCAGATACACTTACAATACAATATTGTTTTTGACATTATACCACGCAAGATTACAAATATAATTGTATTATATTAACGCTGCAGTATATTAGCTTTCATACACTCCTGTAAGAGTAGCATGAAGATAACAGCATAGATAAGAATCACAGTGAGTTTTGATTCATCTCATTTAATTGGCTGAGATGAATGCTTGAAGATGTTACAATTTAAATAATTTACAAACCCAGTAATCAATAAGACCACATAACCAAAAGCTCTATCTTCAAGCCACTTAGAAACTGCAATTAGTCCAAATGCAGTAAATAATTTAAGCCTACATTTCTACAAGGGCTGCAATGCATCTGTGAGAGCTGGCAACCGAGAAAGCTGGCAACCGAGAAAGCTGGCTGGTGGAGGAGATTAAATGTTGAATGGTTGTGAATGAATATTTGGTCATGGAACTTTGAAAAGCTGTACACTATATGCAACATTAGTTCTTGCAGAAATGCAAGACAAGTAACTTCAATATTGCATTGTCTCACTGATTCTTCAATGATATCGTAGATCATAATATTATTTAATATCCTTAAAAAACACTTACTAAAT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU424848 False 2940 lncRNA 0.33 2 17598923 17601882
TU424849 False 3414 lncRNA 0.34 2 17598923 17602356
TU424850 True 1096 lncRNA 0.32 2 17598923 17600038
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Neighbor

gene id symbol gene type direction distance location
LOC110523353 LOC106569485 coding upstream 356012 17235812 ~ 17242911 (+)
LOC110523352 LOC106569472 coding upstream 381737 17191416 ~ 17217186 (+)
LOC100136246 LOC106569430 coding upstream 451145 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 473146 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 527384 17019587 ~ 17071539 (+)
tnpo1 LOC106569531 coding downstream 125165 17727521 ~ 17778710 (+)
LOC110523357 LOC106569536 coding downstream 189504 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 275261 17877617 ~ 17879225 (+)
tmem174 LOC106569163 coding downstream 298137 17900493 ~ 17930164 (+)
btf3 btf3 coding downstream 438347 18040703 ~ 18047631 (+)
G373674 NA non-coding upstream 17725 17580967 ~ 17581198 (+)
G373644 NA non-coding upstream 42884 17555587 ~ 17556039 (+)
G373625 NA non-coding upstream 55210 17543384 ~ 17543713 (+)
G373542 NA non-coding upstream 111874 17483705 ~ 17487049 (+)
G373517 NA non-coding upstream 159193 17439221 ~ 17439730 (+)
G373732 NA non-coding downstream 41689 17644045 ~ 17645733 (+)
G373725 NA non-coding downstream 112296 17714652 ~ 17717041 (+)
G373730 mol1a non-coding downstream 114959 17717315 ~ 17718267 (+)
G373727 NA non-coding downstream 116477 17718833 ~ 17722409 (+)
G373774 NA non-coding downstream 123889 17726245 ~ 17726487 (+)
G372618 LOC105030512 other upstream 716738 16870434 ~ 16882185 (+)
G372373 NA other upstream 860423 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1377990 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1803801 15791559 ~ 15795122 (+)
G371182 NA other upstream 2470106 15124290 ~ 15128817 (+)
G373726 NA other downstream 101757 17704113 ~ 17707757 (+)
arhgef28a LOC106568988 other downstream 465087 18067350 ~ 18177035 (+)
G376320 NA other downstream 2380905 19983261 ~ 19983848 (+)
G377022 NA other downstream 2989124 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 3141228 20508074 ~ 20759255 (+)

Expression

G373691 Expression in all Baseline Samples

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G373691 Expression in each Bioproject

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G373691 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network