G373786


Basic Information

Item Value
gene id G373786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17755140 ~ 17755583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424958
ggaggctatatacggggtgttacggtaccgagtcaatgtggtggctatatacggggtgttacggtaccgagtcaatgtggtggctatatacggggtgttacggtacagagtcaatgtggtggctatatacggggtgttacggtacagagtcaatgtggtggctatatacggggtaccggtaccgagtcaatgtggtggctatatacggggtgttacggtaccgagtcaatgtggtggctatatacggggtgttacggtaccgagtcaatgtggtggctatatacggggtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424958 True 290 lncRNA 0.51 2 17755140 17755583

Neighbor

gene id symbol gene type direction distance location
LOC110523353 LOC106569485 coding upstream 512229 17235812 ~ 17242911 (+)
LOC110523352 LOC106569472 coding upstream 537954 17191416 ~ 17217186 (+)
LOC100136246 LOC106569430 coding upstream 607362 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 629363 17119787 ~ 17125777 (+)
LOC110522812 loxhd1 coding upstream 683601 17019587 ~ 17071539 (+)
LOC110523357 LOC106569536 coding downstream 36277 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 122034 17877617 ~ 17879225 (+)
tmem174 LOC106569163 coding downstream 144910 17900493 ~ 17930164 (+)
btf3 btf3 coding downstream 285120 18040703 ~ 18047631 (+)
arhgef28a LOC106568988 coding downstream 311767 18067350 ~ 18177035 (+)
G373775 NA non-coding upstream 28361 17726572 ~ 17726779 (+)
G373774 NA non-coding upstream 28653 17726245 ~ 17726487 (+)
G373727 NA non-coding upstream 32731 17718833 ~ 17722409 (+)
G373730 mol1a non-coding upstream 36873 17717315 ~ 17718267 (+)
G373725 NA non-coding upstream 38099 17714652 ~ 17717041 (+)
G373788 NA non-coding downstream 9119 17764702 ~ 17765457 (+)
tnpo1 LOC106569531 non-coding downstream 20631 17727521 ~ 17778710 (+)
G373790 NA non-coding downstream 23325 17778908 ~ 17780141 (+)
G373792 NA non-coding downstream 30954 17786537 ~ 17786751 (+)
G373796 NA non-coding downstream 33549 17789132 ~ 17789428 (+)
G373726 NA other upstream 47383 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 872955 16870434 ~ 16882185 (+)
G372373 NA other upstream 1016640 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1534207 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1960018 15791559 ~ 15795122 (+)
G376320 NA other downstream 2227678 19983261 ~ 19983848 (+)
G377022 NA other downstream 2835897 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2988001 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 3075675 20831111 ~ 20842676 (+)

Expression


Co-expression Network