G373797


Basic Information

Item Value
gene id G373797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17789516 ~ 17789847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU424980
CCGGTACGCTTGCCGTGCAgcaagcagagagaacagtctatgactagggtggctggagtctgaccatttttatggccttcctctgacaccgcctggtatagaggtcctggatggcaggaagcttggcctcagtgatgtactgggccgttcacactaccctctgtaatgccttgcggtcggaggcagagcagttgccataccaggcagtgatggaaccagtctcgatggtgcagctatagaaccttttgaggatctgacgacccataccaaatcttttcagtctcctgagggggaataggttttgtcgtaccctcttcaagactgtcttggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424980 True 332 lncRNA 0.53 1 17789516 17789847

Neighbor

gene id symbol gene type direction distance location
tnpo1 LOC106569531 coding upstream 10806 17727521 ~ 17778710 (+)
LOC110523353 LOC106569485 coding upstream 546605 17235812 ~ 17242911 (+)
LOC110523352 LOC106569472 coding upstream 572330 17191416 ~ 17217186 (+)
LOC100136246 LOC106569430 coding upstream 641738 17126356 ~ 17147778 (+)
atp5fa1 LOC106569424 coding upstream 663739 17119787 ~ 17125777 (+)
LOC110523357 LOC106569536 coding downstream 2013 17791860 ~ 17871592 (+)
LOC110523359 LOC106569632 coding downstream 87770 17877617 ~ 17879225 (+)
tmem174 LOC106569163 coding downstream 110646 17900493 ~ 17930164 (+)
btf3 btf3 coding downstream 250856 18040703 ~ 18047631 (+)
arhgef28a LOC106568988 coding downstream 277503 18067350 ~ 18177035 (+)
G373796 NA non-coding upstream 88 17789132 ~ 17789428 (+)
G373792 NA non-coding upstream 2765 17786537 ~ 17786751 (+)
G373790 NA non-coding upstream 9375 17778908 ~ 17780141 (+)
G373788 NA non-coding upstream 24059 17764702 ~ 17765457 (+)
G373833 NA non-coding downstream 93503 17883350 ~ 17887537 (+)
G373848 NA non-coding downstream 122633 17912480 ~ 17954790 (+)
G374094 NA non-coding downstream 212977 18002824 ~ 18003153 (+)
G374095 NA non-coding downstream 220265 18010112 ~ 18010381 (+)
G374106 LOC106569011 non-coding downstream 244025 18033872 ~ 18034614 (+)
G373726 NA other upstream 81759 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 907331 16870434 ~ 16882185 (+)
G372373 NA other upstream 1051016 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1568583 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 1994394 15791559 ~ 15795122 (+)
G376320 NA other downstream 2193414 19983261 ~ 19983848 (+)
G377022 NA other downstream 2801633 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2953737 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 3041411 20831111 ~ 20842676 (+)

Expression


Co-expression Network