Gene
RNA
| Item | Value |
|---|---|
| gene id | G373848 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17912480 ~ 17954790 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU425044 | False | 269 | lncRNA | 0.51 | 2 | 17912480 | 17954790 |
| TU425045 | True | 267 | lncRNA | 0.51 | 2 | 17948173 | 17954790 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523359 | LOC106569632 | coding | upstream | 33255 | 17877617 ~ 17879225 (+) |
| LOC110523357 | LOC106569536 | coding | upstream | 40888 | 17791860 ~ 17871592 (+) |
| tnpo1 | LOC106569531 | coding | upstream | 133770 | 17727521 ~ 17778710 (+) |
| LOC110523353 | LOC106569485 | coding | upstream | 669569 | 17235812 ~ 17242911 (+) |
| LOC110523352 | LOC106569472 | coding | upstream | 695294 | 17191416 ~ 17217186 (+) |
| btf3 | btf3 | coding | downstream | 85913 | 18040703 ~ 18047631 (+) |
| arhgef28a | LOC106568988 | coding | downstream | 112560 | 18067350 ~ 18177035 (+) |
| LOC110523365 | LOC106568911 | coding | downstream | 441538 | 18396328 ~ 18410126 (+) |
| LOC110523366 | nsa2 | coding | downstream | 460984 | 18415774 ~ 18422258 (+) |
| egfl7 | LOC106568866 | coding | downstream | 532830 | 18487620 ~ 18506142 (+) |
| G373833 | NA | non-coding | upstream | 24943 | 17883350 ~ 17887537 (+) |
| G373797 | NA | non-coding | upstream | 122633 | 17789516 ~ 17789847 (+) |
| G373796 | NA | non-coding | upstream | 123052 | 17789132 ~ 17789428 (+) |
| G373792 | NA | non-coding | upstream | 125729 | 17786537 ~ 17786751 (+) |
| G373790 | NA | non-coding | upstream | 132339 | 17778908 ~ 17780141 (+) |
| G374094 | NA | non-coding | downstream | 48034 | 18002824 ~ 18003153 (+) |
| G374095 | NA | non-coding | downstream | 55322 | 18010112 ~ 18010381 (+) |
| G374106 | LOC106569011 | non-coding | downstream | 79082 | 18033872 ~ 18034614 (+) |
| G374105 | NA | non-coding | downstream | 94149 | 18048939 ~ 18049208 (+) |
| G374157 | NA | non-coding | downstream | 166601 | 18121391 ~ 18122615 (+) |
| G373726 | NA | other | upstream | 204723 | 17704113 ~ 17707757 (+) |
| G372618 | LOC105030512 | other | upstream | 1030295 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 1173980 | 16735642 ~ 16738500 (+) |
| G372281 | LOC106569177 | other | upstream | 1691547 | 16218328 ~ 16220933 (+) |
| G371615 | LOC100194725 | other | upstream | 2117358 | 15791559 ~ 15795122 (+) |
| G376320 | NA | other | downstream | 2028471 | 19983261 ~ 19983848 (+) |
| G377022 | NA | other | downstream | 2636690 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 2788794 | 20508074 ~ 20759255 (+) |
| LOC110522817 | LOC106568462 | other | downstream | 2876468 | 20831111 ~ 20842676 (+) |
