G374094


Basic Information

Item Value
gene id G374094
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18002824 ~ 18003153 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425313
gatctggaagagtctggtcgactggcagatctggaagagtctggtcgactggcagatctggaagagtctggtcgactggcagatctggaagagtctggacgactggcagatctggaagagtctggacgactggcagatctggaagagtctggacgacacagactggctgctctggctgctccatgctgactgacagctctggctgctccatgctggcagactgctctggctgctccatgatgactggtagctctggctgctccatgctgactggctgctccatgctgactggcagctctggctgctccatgctgactggctgctccatgc

Function

NR:

description
PREDICTED: proline-rich receptor-like protein kinase PERK8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425313 True 330 lncRNA 0.58 1 18002824 18003153

Neighbor

gene id symbol gene type direction distance location
tmem174 LOC106569163 coding upstream 72660 17900493 ~ 17930164 (+)
LOC110523359 LOC106569632 coding upstream 123599 17877617 ~ 17879225 (+)
LOC110523357 LOC106569536 coding upstream 131232 17791860 ~ 17871592 (+)
tnpo1 LOC106569531 coding upstream 224114 17727521 ~ 17778710 (+)
LOC110523353 LOC106569485 coding upstream 759913 17235812 ~ 17242911 (+)
btf3 btf3 coding downstream 37550 18040703 ~ 18047631 (+)
arhgef28a LOC106568988 coding downstream 64197 18067350 ~ 18177035 (+)
LOC110523365 LOC106568911 coding downstream 393175 18396328 ~ 18410126 (+)
LOC110523366 nsa2 coding downstream 412621 18415774 ~ 18422258 (+)
egfl7 LOC106568866 coding downstream 484467 18487620 ~ 18506142 (+)
G373848 NA non-coding upstream 48034 17912480 ~ 17954790 (+)
G373833 NA non-coding upstream 115287 17883350 ~ 17887537 (+)
G373797 NA non-coding upstream 212977 17789516 ~ 17789847 (+)
G373796 NA non-coding upstream 213396 17789132 ~ 17789428 (+)
G373792 NA non-coding upstream 216073 17786537 ~ 17786751 (+)
G374095 NA non-coding downstream 6959 18010112 ~ 18010381 (+)
G374106 LOC106569011 non-coding downstream 30719 18033872 ~ 18034614 (+)
G374105 NA non-coding downstream 45786 18048939 ~ 18049208 (+)
G374157 NA non-coding downstream 118238 18121391 ~ 18122615 (+)
G374120 NA non-coding downstream 176389 18179542 ~ 18181098 (+)
G373726 NA other upstream 295067 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1120639 16870434 ~ 16882185 (+)
G372373 NA other upstream 1264324 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1781891 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 2207702 15791559 ~ 15795122 (+)
G376320 NA other downstream 1980108 19983261 ~ 19983848 (+)
G377022 NA other downstream 2588327 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2740431 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2828105 20831111 ~ 20842676 (+)

Expression


Co-expression Network