G374106 (LOC106569011)


Basic Information

Item Value
gene id G374106
gene name LOC106569011
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18033872 ~ 18034614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425325
GTTTCCGTCGTCTCAGAAAGCTGCCGTTATCGAACATATCGGCGGACTCCGGGTCTAGGGTCCAGTAGTTTCCCTTCCCGGGGTTCCCCGGTTCCCTCGGTATCTTGACGAAACAGTCATTCAGGGACAAGTTGTGTCGGATCGAGTTCTGCCACGCGGGGAACTTTTCCCGGTAGTACGGGAAACGGTTGCTGATGAAATCGCAAATTTCGCTGAGGGTGAGCCGCTTCTTGGGGCTCTGAAGAATTGACATAGTGATCAAGGCGATATAGGAGTAAGGGGGCTTCACCAGGGTGTTCTTACTGGCTGGTTTGTAAGGATCCCGGGACGAGGAGCTGTCCAGGCATGGCGGGGAGCCAGACAGCAGGTCATCGTGCATCTGCGCCACCTCGTCTACGTAAGAGCGAGTTTGGCTGTCCCCATCCTCCCCCTCGCCGACCACGTCGATGTCTGTCTCTTCCGAAAGGATGGAGGCATCCGACATCTCGGAGCTCAGAGTCATGGCTCACCGCTAGCTGTGTAGAGGCTGCACTGTGCGCTCCCAGAAGCTACGGCGGATAGGAAGAGGATATACTGCCGGTGCTACTCTGCCCTCTTCCAAGACAACTCATATGATGGAATTAGAGGAGCACGCCGGCGGTAATAGATGTCCCTTTTTCCCAACCACTACCATATGTTTTAGGGCTTTTTTCGTTGTTCAATATCGCACATCCGGATACTAGCctgtggaaagacctgaaaaa

Function

NR:

description
PREDICTED: forkhead box protein D1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425325 True 743 lncRNA 0.54 1 18033872 18034614

Neighbor

gene id symbol gene type direction distance location
tmem174 LOC106569163 coding upstream 103708 17900493 ~ 17930164 (+)
LOC110523359 LOC106569632 coding upstream 154647 17877617 ~ 17879225 (+)
LOC110523357 LOC106569536 coding upstream 162280 17791860 ~ 17871592 (+)
tnpo1 LOC106569531 coding upstream 255162 17727521 ~ 17778710 (+)
LOC110523353 LOC106569485 coding upstream 790961 17235812 ~ 17242911 (+)
btf3 btf3 coding downstream 6089 18040703 ~ 18047631 (+)
arhgef28a LOC106568988 coding downstream 32736 18067350 ~ 18177035 (+)
LOC110523365 LOC106568911 coding downstream 361714 18396328 ~ 18410126 (+)
LOC110523366 nsa2 coding downstream 381160 18415774 ~ 18422258 (+)
egfl7 LOC106568866 coding downstream 453006 18487620 ~ 18506142 (+)
G374095 NA non-coding upstream 23491 18010112 ~ 18010381 (+)
G374094 NA non-coding upstream 30719 18002824 ~ 18003153 (+)
G373848 NA non-coding upstream 79082 17912480 ~ 17954790 (+)
G373833 NA non-coding upstream 146335 17883350 ~ 17887537 (+)
G373797 NA non-coding upstream 244025 17789516 ~ 17789847 (+)
G374105 NA non-coding downstream 14325 18048939 ~ 18049208 (+)
G374157 NA non-coding downstream 86777 18121391 ~ 18122615 (+)
G374120 NA non-coding downstream 144928 18179542 ~ 18181098 (+)
G374291 NA non-coding downstream 147865 18182479 ~ 18182694 (+)
G374292 NA non-coding downstream 148136 18182750 ~ 18183159 (+)
G373726 NA other upstream 326115 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1151687 16870434 ~ 16882185 (+)
G372373 NA other upstream 1295372 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 1812939 16218328 ~ 16220933 (+)
G371615 LOC100194725 other upstream 2238750 15791559 ~ 15795122 (+)
G376320 NA other downstream 1948647 19983261 ~ 19983848 (+)
G377022 NA other downstream 2556866 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2708970 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2796644 20831111 ~ 20842676 (+)

Expression


Co-expression Network