XLOC_023186


Basic Information

Item Value
gene id XLOC_023186
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 41270080 ~ 41271634 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046831
cacagacacacgtacacacacacacacctgcactcaCCAGATGATGATCTGGGAATCCTGCACTTTTATGGCGATCCCGCAATAAAACAGCGGTGTGTTGAGGATGTGGCTGTGCTGTTGCTCATTCCTGGCATGTTCAGATGTGCGCACGCTTCACTCTGAGGACCAGAACAGCTTCAGGATGGACGTGGAGCTCCTGAGAGAACAGTACAGCTCCAGCAGAGACACACACCGACGACACACACACGTCGTCTGCTTCAGGAACGCAGACTGCGGTGACGCGGAGATAAACGGCAGAGGTTTTCTGGATGTGGTTCCTTCTGTCCTGCGGAGCCAGGCTGTGTGTGTTCTGGATGTTCCTCACGAATCGTGTTCTTCAGATCTGGATGAAAAGCGTCCGGCACACTGGACTGGACCATCTGAGCATAGACGGCAGTGTTCGGCTGGAGGATCAGAGTCAGACGGGCTCTCCGAGGACTCGAACCCTCATCCGAAGGCCACTAGAAAGCTCTCAGCTCCGGTGCTGTTGAGTTCAGATAATCAGCGCTCCAGATATTATCCCTTCCCTCAGAAGAAGAGCTTGAGGAAATCAGAGACGGCCCGGAGACTCGGCCTCTACGCTTCATTCTGATTCTGAAGCTGTAATCAATTCATAGACTTGCAGCACAATGCATATAATTCATTCCAGAATTAGAGGAACATTTCAAGCATTGATTACGCTgagattataaataataaatgtataatttacagtaaacaatGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046831 True 763 lncRNA 0.50 2 41270080 41271634

Neighbor

gene id symbol gene type direction distance location
XLOC_023185 scn5lab coding upstream 126824 40905100 ~ 41143256 (+)
XLOC_023183 gorasp1b coding upstream 396980 40860320 ~ 40873100 (+)
XLOC_023184 NA coding upstream 399495 40869279 ~ 40870585 (+)
XLOC_023182 NA coding upstream 464490 40708722 ~ 40805590 (+)
XLOC_023181 NA coding upstream 594205 40654101 ~ 40675875 (+)
XLOC_023187 nub1 coding downstream 1618 41273252 ~ 41303239 (+)
XLOC_023188 NA coding downstream 40673 41312307 ~ 41316882 (+)
XLOC_023189 NA coding downstream 114991 41386625 ~ 41388639 (+)
XLOC_023190 NA coding downstream 130911 41402545 ~ 41444719 (+)
XLOC_023191 NA coding downstream 161881 41433515 ~ 41435485 (+)
XLOC_023180 CU929259.2 non-coding upstream 621708 40648256 ~ 40648372 (+)
XLOC_023177 NA non-coding upstream 1059812 40209614 ~ 40210268 (+)
XLOC_023192 CABZ01080380.1 non-coding downstream 265428 41537062 ~ 41537191 (+)

Expression


Co-expression Network