G374389



Basic Information


Item Value
gene id G374389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18283987 ~ 18284472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU425638
ACCTAGAACACTCATCTAGGGGAAGTTGATGACTGAGTGACCTAGAACATTCATCTAGGGGAAGTTGATGACTGAGTGACCTAGAACTCTCATCTAGGGGAAGTTGATGACTGAGTGACCTAGATAACTCATGTAGGGGAAGTTGATGATGGAAGAGAATTACTGGTGAAGGTGGTACAGGTTTTAGACTGATAGACACACTGACAGAGGTAAGAAAAACACATACTGACTTGTATAGCACACGCACAACAAATACAAACACTTTAATCTATTCGTAATCACCTTATTTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU425638 True 291 lncRNA 0.41 2 18283987 18284472

Neighbor


gene id symbol gene type direction distance location
arhgef28a LOC106568988 coding upstream 106952 18067350 ~ 18177035 (+)
btf3 btf3 coding upstream 236356 18040703 ~ 18047631 (+)
tmem174 LOC106569163 coding upstream 353823 17900493 ~ 17930164 (+)
LOC110523359 LOC106569632 coding upstream 404762 17877617 ~ 17879225 (+)
LOC110523357 LOC106569536 coding upstream 412395 17791860 ~ 17871592 (+)
LOC110523365 LOC106568911 coding downstream 111856 18396328 ~ 18410126 (+)
LOC110523366 nsa2 coding downstream 131302 18415774 ~ 18422258 (+)
egfl7 LOC106568866 coding downstream 203148 18487620 ~ 18506142 (+)
LOC110523370 fa69b coding downstream 273680 18558152 ~ 18578228 (+)
LOC110523377 LOC106568724 coding downstream 1073799 19358271 ~ 19364089 (+)
G374372 NA non-coding upstream 23456 18260273 ~ 18260531 (+)
G374367 NA non-coding upstream 27038 18256524 ~ 18256949 (+)
G374361 NA non-coding upstream 35699 18248052 ~ 18248288 (+)
G374359 NA non-coding upstream 37284 18246380 ~ 18246703 (+)
G374331 NA non-coding upstream 59993 18223729 ~ 18223994 (+)
G374438 NA non-coding downstream 98642 18383114 ~ 18386763 (+)
G374463 NA non-coding downstream 157748 18442220 ~ 18442478 (+)
G374488 NA non-coding downstream 196859 18481331 ~ 18481568 (+)
G374490 NA non-coding downstream 199796 18484268 ~ 18484500 (+)
G374491 NA non-coding downstream 201913 18486385 ~ 18486613 (+)
G373726 NA other upstream 576230 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1401802 16870434 ~ 16882185 (+)
G372373 NA other upstream 1545487 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2063054 16218328 ~ 16220933 (+)
G376320 NA other downstream 1698789 19983261 ~ 19983848 (+)
G377022 NA other downstream 2307008 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2459112 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2546786 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2823697 21108129 ~ 21160149 (+)

Expression



Co-expression Network