G374488


Basic Information

Item Value
gene id G374488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18481331 ~ 18481568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425755
TCCGCTTCCTGTACAAGTGAGATTTTTATTGTTCCAAGGGACCCAACTCCAGAATCTCACTACCACAGCCATTTCCTGCTTCCTCTTCGGCAGGAAGTGCTGCTTCGCTTCAGTTATTTTTTTGGTCTCAGCAATCGGCATACAAAACTTTGCTTGCGTCAGGCCAAGCCTTGATTTCAAAGAAAAATAATAATTCCTTGAAAAGAAACATACACTCGCTCACACACTCGCACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425755 True 238 lncRNA 0.43 1 18481331 18481568

Neighbor

gene id symbol gene type direction distance location
LOC110523366 nsa2 coding upstream 59073 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 71205 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 304296 18067350 ~ 18177035 (+)
btf3 btf3 coding upstream 433700 18040703 ~ 18047631 (+)
tmem174 LOC106569163 coding upstream 551167 17900493 ~ 17930164 (+)
egfl7 LOC106568866 coding downstream 6052 18487620 ~ 18506142 (+)
LOC110523370 fa69b coding downstream 76584 18558152 ~ 18578228 (+)
LOC110523377 LOC106568724 coding downstream 876703 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 1018036 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1569825 20051393 ~ 20381619 (+)
G374463 NA non-coding upstream 38853 18442220 ~ 18442478 (+)
G374438 NA non-coding upstream 94568 18383114 ~ 18386763 (+)
G374389 NA non-coding upstream 196859 18283987 ~ 18284472 (+)
G374372 NA non-coding upstream 220800 18260273 ~ 18260531 (+)
G374367 NA non-coding upstream 224382 18256524 ~ 18256949 (+)
G374490 NA non-coding downstream 2700 18484268 ~ 18484500 (+)
G374491 NA non-coding downstream 4817 18486385 ~ 18486613 (+)
G374492 NA non-coding downstream 5468 18487036 ~ 18487244 (+)
G374517 NA non-coding downstream 64539 18546107 ~ 18546315 (+)
G374518 NA non-coding downstream 64903 18546471 ~ 18557661 (+)
G373726 NA other upstream 773574 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1599146 16870434 ~ 16882185 (+)
G372373 NA other upstream 1742831 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2260398 16218328 ~ 16220933 (+)
G376320 NA other downstream 1501693 19983261 ~ 19983848 (+)
G377022 NA other downstream 2109912 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2262016 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2349690 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2626601 21108129 ~ 21160149 (+)

Expression


Co-expression Network