G374491


Basic Information

Item Value
gene id G374491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18486385 ~ 18486613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425758
ggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgccaatgacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425758 True 229 lncRNA 0.43 1 18486385 18486613

Neighbor

gene id symbol gene type direction distance location
LOC110523366 nsa2 coding upstream 64127 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 76259 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 309350 18067350 ~ 18177035 (+)
btf3 btf3 coding upstream 438754 18040703 ~ 18047631 (+)
tmem174 LOC106569163 coding upstream 556221 17900493 ~ 17930164 (+)
egfl7 LOC106568866 coding downstream 1007 18487620 ~ 18506142 (+)
LOC110523370 fa69b coding downstream 71539 18558152 ~ 18578228 (+)
LOC110523377 LOC106568724 coding downstream 871658 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 1012991 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1564780 20051393 ~ 20381619 (+)
G374490 NA non-coding upstream 1885 18484268 ~ 18484500 (+)
G374488 NA non-coding upstream 4817 18481331 ~ 18481568 (+)
G374463 NA non-coding upstream 43907 18442220 ~ 18442478 (+)
G374438 NA non-coding upstream 99622 18383114 ~ 18386763 (+)
G374389 NA non-coding upstream 201913 18283987 ~ 18284472 (+)
G374492 NA non-coding downstream 423 18487036 ~ 18487244 (+)
G374517 NA non-coding downstream 59494 18546107 ~ 18546315 (+)
G374518 NA non-coding downstream 59858 18546471 ~ 18557661 (+)
G374522 NA non-coding downstream 73332 18559945 ~ 18560162 (+)
G373726 NA other upstream 778628 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1604200 16870434 ~ 16882185 (+)
G372373 NA other upstream 1747885 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2265452 16218328 ~ 16220933 (+)
G376320 NA other downstream 1496648 19983261 ~ 19983848 (+)
G377022 NA other downstream 2104867 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2256971 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2344645 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2621556 21108129 ~ 21160149 (+)

Expression


Co-expression Network