G374518



Basic Information


Item Value
gene id G374518
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18546471 ~ 18557661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU425786
ccatttagtcgaggtaatatgtccatgtaggtagagttgaagtgactatgcataggttataaacagagagtagcagaagcataaaagaggggtctgggtagccctttgattagctgttcaggagtcttatggcttggtggtagaagctattaagaagtctcttggacctagacttggggttccagtacctcttgccgtgcggtagcacagagaacagtctatgactacggtgactggagtctgacaattttttagggccttcctctgacaccgcctgatatagaggttctggatggcaggaagcttggcccaagtgatgtatCAGTGATGTTTCCAATGTATAGTCTATTACAGTGTATTGCATTGGGGGCTATGGAGGGGGTGGAGAATGAAGTGCTGCTGGATATGTACTACACAGTCCACCTCCAAAACTAAAATATTAGGTTAGTagagaccctactgagtattttCCACACCACTTTAGCTGACAGGTAGAACAagtttctaaacacatatatat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU425786 True 520 lncRNA 0.44 2 18546471 18557661

Neighbor


gene id symbol gene type direction distance location
egfl7 LOC106568866 coding upstream 40329 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 124213 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 136345 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 369436 18067350 ~ 18177035 (+)
btf3 btf3 coding upstream 498840 18040703 ~ 18047631 (+)
LOC110523370 fa69b coding downstream 491 18558152 ~ 18578228 (+)
LOC110523377 LOC106568724 coding downstream 800610 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 941943 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1493732 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1832869 20390530 ~ 20414156 (+)
G374517 NA non-coding upstream 156 18546107 ~ 18546315 (+)
G374492 NA non-coding upstream 59227 18487036 ~ 18487244 (+)
G374491 NA non-coding upstream 59858 18486385 ~ 18486613 (+)
G374490 NA non-coding upstream 61971 18484268 ~ 18484500 (+)
G374488 NA non-coding upstream 64903 18481331 ~ 18481568 (+)
G374522 NA non-coding downstream 2284 18559945 ~ 18560162 (+)
G374526 NA non-coding downstream 7424 18565085 ~ 18624713 (+)
G374504 NA non-coding downstream 21024 18578685 ~ 18581458 (+)
G374536 NA non-coding downstream 31988 18589649 ~ 18590768 (+)
G373726 NA other upstream 838714 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1664286 16870434 ~ 16882185 (+)
G372373 NA other upstream 1807971 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2325538 16218328 ~ 16220933 (+)
G376320 NA other downstream 1425600 19983261 ~ 19983848 (+)
G377022 NA other downstream 2033819 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 2185923 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 other downstream 2273597 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2550508 21108129 ~ 21160149 (+)

Expression



Co-expression Network