G374504


Basic Information

Item Value
gene id G374504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18578685 ~ 18581458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425771
GCCATGAAGGGATGCACCCGATTGACAATGATGTTTATATATCCCTTGGCATTCAAACATTGTGCCACTTATCAAGGGGCCCAATGTGTGCCATGAAAACACACCACCAACCTGCAATGTTGACACGCGGCATGATGGATGCATGTACTCGTGGTTCTCGCCATACCGAAGTCCTCCCATCAGCGTGAAACAGCAGGAACTGGaattcatcagaccaggcaatgtttttcaaaTTCTCTATGGTTTGTTCCTTAGTCCACTGaaacccattttttttttttgtgctgaAAGTGGAACTCCAAGGTCGTCGACTGCAACACCCCATTCGTGTCAAGGTACGACGAGTTGTGCATTATTTTGGGTCTTTGGGCACCAATGTTGTACTGGACTGTCAGTTGACTAACTGTAGCCAGTCTGTTACTCTGCACAATTCAGGTCAGCCTCCTTTGTCGTCTTTCGTCAAAGACCCATTTTCGGCCACAGGCCTGccgttggctggaagtcctttaggcggtggaccattcttgagacaCGGGAAacttgagcatgaaaaacccagcagcattgcagtttttGACAAACTGATACGCCTGGCAGCTACTATcatactccgttcaaaggcacttcaatcttgcccattcaccctctgaatggcacacttaCACAATCCATGTGTCTCAAGTATTAAATCTTTTAACCCATCTCCTCACCTTCATtacacagattgaagtggattcaacatGACAtcaaggatcatagctttcacctggtcaggccatgtcatggaaagagcaggtgttcctaatgttttgtacacagtgctTGTTGCCGtaagagttgtgcaaagttggtagaatcttattccAAATTATTCAGAACTAAtggatgccaaaggtgcttccaagTACTAAGTTTAGGGTGGAGACTTATCCAAATTATGATATTTCAGTGTTTAATTTGTTAAATTTTCTATAACTTTAACGTTGAAGATGTGGGgtaggttgtgtagatctgtAGGAATATAATAAAATGTAATCCCTTAGATTACATATTAATGCAGCAAAACCCAAAACAGGGCCCTACGCTATAGAATATGTCACCATAAACAGGCAAGAGTGTGGCCTGCACAATCCTTTCTCTACCATCACCTTGAATCTTCAACTTTGAAACTGGCCACATCTTGGCTTCTTCGTCACATCTGCAATCTGTCAAAGAATCAGGAAATGGGTGAGAAAACAATAGCCAAAAGACCTATCAATCCTCCAAAATGATCAAGAAAAGTAGACCTCAGATCAAAGTCAATCAAAACTCAAAGTATTGGACTAATGgcagttaccagtcagtaaacaTATTAACACAAGAAACACAACTGCTGAGGGTGAGGGATCTTGAAGGAAAAGTCCACCACAGTTATTGGTGTTTGTTCCATTGTTGACATAAGTAAAACATTTTTGGACAATGTCACCAATGGACTAAAACAATAAAtaccaaaatattttttctttaacTGGCTCACTCCTGTTCAAACACTTCCTGTACACTAAGAACCCTTTTCAGAGGGTCTAAATGGTTCCTTGGTGGCCAAATGTTAGAGCTATGATCATTTCAAGTACCCACCGTTCTAGGTCCTCAGTATATAAATATCTTTCACTCTCCGCCCCTCATCACACAGGCTCAACACGTACAGTCAGACTGCAACGCCTCGAGGGGCGGATTGGTCAGAGACCAATACACTTAGCCAGTACGTTATCCAGTGAGGAGTGTAATGACCATGGCTTATGGCTTGGTCATCCCCCACTACGACCACAGTTGCTACTGCTGCACCTCCAGACTGCTCTTCATCTGAAATTAACATCCAAAATACTATAGGTTAGGTTTGAAGAGCTACAAGGAAACTGATTAAGGCAACAAAGTTAAAAGTACATAAAGTAGTGAGTCCAAGTACCTTGCTGCTAGTTCTACAGCATCCATTTTACACCAAGATTAACAATTCTTAATTAGACTGGTTGGCTGACAATGTCACATATGACGTACGCGTCGATGTGGCCGGAAGGCTTGTGTTATCATGTCAGATagctatcaacaatgacaagaagctgccatgtggggaatcgtaggtgaCACATCTCAGCTAGTTCTCTTGTTGAGACCATGTCTTGTTTAGAGGCATTTTCACAGATTTCATGTCAATGTTAATATGGCTCAAATTTTCTAGCCAGCCAACAACTTTCAATGTATTTGAGACAAGTGctcattttgtatttgtatttattatgaatcagctactcttcctggggtccagcaaaattaagacaGTTTACACAAtcttaaaaacattacaatacattcacagatttcacaacacactgtgtgccctcacgCCACTAACACATATCTatagtactaaatccatgtgtatgtatagtgcgtattttattgtgcgtgtgtgtgtgtgtttgtgtgtgcatgtgtctgtgctaatgtttgtgttgcttcacagtccccgctgttccataaggtgtttttttgtatctgttttttaaatcaaacttgatgtggaatagagttccatgtagtcatggctctatgtagtactgtgtgcctcccatagtctgttctggacttggggactgtgaagagagctCTTGTGGCATTGTGCagatgtatttatgttttcaataaacattg

Function

NR:

description
acidic leucine-rich nuclear phosphoprotein 32 family member B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425771 True 2688 lncRNA 0.42 2 18578685 18581458

Neighbor

gene id symbol gene type direction distance location
LOC110523370 fa69b coding upstream 457 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 72543 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 156427 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 168559 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 401650 18067350 ~ 18177035 (+)
LOC110523377 LOC106568724 coding downstream 776813 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 918146 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1469935 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1809072 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1926616 20508074 ~ 20759255 (+)
G374522 NA non-coding upstream 18523 18559945 ~ 18560162 (+)
G374518 NA non-coding upstream 21024 18546471 ~ 18557661 (+)
G374517 NA non-coding upstream 32370 18546107 ~ 18546315 (+)
G374492 NA non-coding upstream 91441 18487036 ~ 18487244 (+)
G374536 NA non-coding downstream 8191 18589649 ~ 18590768 (+)
G374582 NA non-coding downstream 61134 18642592 ~ 18737468 (+)
G374907 NA non-coding downstream 168160 18749618 ~ 18749824 (+)
G374908 NA non-coding downstream 168566 18750024 ~ 18750238 (+)
G374943 NA non-coding downstream 197810 18779268 ~ 18779531 (+)
G373726 NA other upstream 870928 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1696500 16870434 ~ 16882185 (+)
G372373 NA other upstream 1840185 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2357752 16218328 ~ 16220933 (+)
G376320 NA other downstream 1401803 19983261 ~ 19983848 (+)
G377022 NA other downstream 2010022 20591480 ~ 20596863 (+)
LOC110522817 LOC106568462 other downstream 2249800 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2526711 21108129 ~ 21160149 (+)

Expression


Co-expression Network