G374582


Basic Information

Item Value
gene id G374582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18642592 ~ 18737468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU425853
aaatatttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatgtaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU425853 True 296 lncRNA 0.42 2 18642592 18737468

Neighbor

gene id symbol gene type direction distance location
LOC110523370 fa69b coding upstream 64364 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 136450 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 220334 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 232466 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 465557 18067350 ~ 18177035 (+)
LOC110523377 LOC106568724 coding downstream 620803 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 762136 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1313925 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1653062 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1770606 20508074 ~ 20759255 (+)
G374526 NA non-coding upstream 17879 18565085 ~ 18624713 (+)
G374536 NA non-coding upstream 51824 18589649 ~ 18590768 (+)
G374504 NA non-coding upstream 61134 18578685 ~ 18581458 (+)
G374522 NA non-coding upstream 82430 18559945 ~ 18560162 (+)
G374907 NA non-coding downstream 12150 18749618 ~ 18749824 (+)
G374908 NA non-coding downstream 12556 18750024 ~ 18750238 (+)
G374943 NA non-coding downstream 41800 18779268 ~ 18779531 (+)
G374963 NA non-coding downstream 54804 18792272 ~ 18792509 (+)
G375010 NA non-coding downstream 115815 18853283 ~ 18857666 (+)
G373726 NA other upstream 934835 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 1760407 16870434 ~ 16882185 (+)
G372373 NA other upstream 1904092 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2421659 16218328 ~ 16220933 (+)
G376320 NA other downstream 1245793 19983261 ~ 19983848 (+)
G377022 NA other downstream 1854012 20591480 ~ 20596863 (+)
LOC110522817 LOC106568462 other downstream 2093790 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2370701 21108129 ~ 21160149 (+)

Expression


Co-expression Network