G375041


Basic Information

Item Value
gene id G375041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 18896463 ~ 18948168 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426363
ggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccctgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggtcattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccttcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttgattttatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaatgacactttttatggatatctttaagaaatggctttcttcttgctactcttccataaaggccagatttgtgcaatatacaactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagaaggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccaaatttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgcttttaacggacctcagactatcacagtgca

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426363 True 1092 lncRNA 0.43 2 18896463 18948168

Neighbor

gene id symbol gene type direction distance location
LOC110523370 fa69b coding upstream 318235 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 390321 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 474205 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 486337 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 719428 18067350 ~ 18177035 (+)
LOC110523377 LOC106568724 coding downstream 410103 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 551436 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 1103225 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1442362 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1559906 20508074 ~ 20759255 (+)
G375018 NA non-coding upstream 21388 18871112 ~ 18875075 (+)
G375019 NA non-coding upstream 30082 18864998 ~ 18866381 (+)
G375010 NA non-coding upstream 38797 18853283 ~ 18857666 (+)
G374963 NA non-coding upstream 103954 18792272 ~ 18792509 (+)
G374943 NA non-coding upstream 116932 18779268 ~ 18779531 (+)
G375115 NA non-coding downstream 106435 19054603 ~ 19055092 (+)
G375319 NA non-coding downstream 163006 19111174 ~ 19112553 (+)
G375322 NA non-coding downstream 165403 19113571 ~ 19114533 (+)
G375365 NA non-coding downstream 207749 19155917 ~ 19156182 (+)
G375369 NA non-coding downstream 211147 19159315 ~ 19159534 (+)
G373726 NA other upstream 1188706 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 2014278 16870434 ~ 16882185 (+)
G372373 NA other upstream 2157963 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 2675530 16218328 ~ 16220933 (+)
G376320 NA other downstream 1035093 19983261 ~ 19983848 (+)
G377022 NA other downstream 1643312 20591480 ~ 20596863 (+)
LOC110522817 LOC106568462 other downstream 1883090 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 2160001 21108129 ~ 21160149 (+)

Expression


Co-expression Network