G375556


Basic Information

Item Value
gene id G375556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19302255 ~ 19303099 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426994
gcctctcttttcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttttcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttttcccctgttgttgtctctttttcctcctccctctctttcctgacTCTCTTCTCCCCTGTTGttgtctctttttcctctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctctcctccctctctttcctgcctctcttttcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctctctttcctgcctctcttctcccctgtTGTTGTTtctttttcctcctccctctctttcctgcctctcttctcccctgttgttgtctctttttcctcctccctctctttcctgccTCTCTTTTCCCCCGTTGttgtctctttttcctctcctgcctctctttcctgcctctcttctcccctgttgttctctttttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426994 True 756 lncRNA 0.50 2 19302255 19303099

Neighbor

gene id symbol gene type direction distance location
LOC118964778 NA coding downstream 97589 19204538 ~ 19204666 (-)
LOC110522815 LOC106568813 coding downstream 203785 18962511 ~ 19098470 (-)
LOC110523374 LOC106568818 coding downstream 422067 18853417 ~ 18880188 (-)
LOC118964544 LOC106568982 coding downstream 558723 18742518 ~ 18743532 (-)
LOC110523372 LOC106568827 coding downstream 702889 18589654 ~ 18599366 (-)
LOC110523379 LOC106568729 coding upstream 60288 19363387 ~ 19375235 (-)
LOC110523380 LOC106568716 coding upstream 93086 19396185 ~ 19428814 (-)
LOC110523384 LOC106568686 coding upstream 204624 19507723 ~ 19559754 (-)
LOC110523382 prkaa1 coding upstream 258780 19561879 ~ 19580316 (-)
LOC110523387 LOC106562971 coding upstream 287045 19590144 ~ 19618069 (-)
G375499 NA non-coding downstream 43255 19253727 ~ 19259000 (-)
G375536 NA non-coding downstream 51836 19245324 ~ 19250419 (-)
G375537 NA non-coding downstream 55446 19244288 ~ 19246809 (-)
G375496 NA non-coding downstream 58308 19165090 ~ 19243947 (-)
G375373 NA non-coding downstream 140391 19161588 ~ 19161864 (-)
G375583 NA non-coding upstream 46471 19349570 ~ 19349820 (-)
G375584 NA non-coding upstream 46743 19349842 ~ 19350144 (-)
G375588 NA non-coding upstream 52029 19355128 ~ 19355336 (-)
G375589 NA non-coding upstream 52355 19355454 ~ 19355713 (-)
G375597 NA non-coding upstream 67473 19370572 ~ 19372080 (-)
G374786 NA other downstream 743088 18558140 ~ 18559167 (-)
G374189 NA other downstream 1299085 18002820 ~ 18003170 (-)
LOC110523354 LOC106569496 other downstream 1780768 17483696 ~ 17521507 (-)
G373228 LOC106569424 other downstream 2176448 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 2360064 16909582 ~ 16942359 (-)
G377800 NA other upstream 1390997 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 1401514 20704613 ~ 20705140 (-)
G377991 NA other upstream 1726359 21029458 ~ 21029783 (-)
G378359 NA other upstream 2488563 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 2874166 22177265 ~ 22179322 (-)

Expression


Co-expression Network