G375445


Basic Information

Item Value
gene id G375445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19309904 ~ 19310293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426852
ttgtagcgatgcagtattgaggttacaagaagaaacattgtagcgatgcagtattgaggttacaagaagaaacattgtagctatgcagtattgaggttacaagaagaaacattgtagctatgcagtattgaggttaggagaagaaacattgtagctacgcagtattgaggttacaagaagaaacattgtagctatgcagtattgaggttacaagaagaaacattgtagctatgcagtattga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426852 True 242 lncRNA 0.37 2 19309904 19310293

Neighbor

gene id symbol gene type direction distance location
LOC110523370 fa69b coding upstream 731676 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 803762 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 887646 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 899778 18396328 ~ 18410126 (+)
arhgef28a LOC106568988 coding upstream 1132869 18067350 ~ 18177035 (+)
LOC110523377 LOC106568724 coding downstream 47978 19358271 ~ 19364089 (+)
LOC110523383 LOC106568686 coding downstream 189311 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 741100 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1080237 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1197781 20508074 ~ 20759255 (+)
G375444 NA non-coding upstream 596 19308826 ~ 19309308 (+)
G375421 NA non-coding upstream 56660 19252927 ~ 19253244 (+)
G375374 NA non-coding upstream 147323 19162252 ~ 19162581 (+)
G375369 NA non-coding upstream 150370 19159315 ~ 19159534 (+)
G375365 NA non-coding upstream 153722 19155917 ~ 19156182 (+)
G375477 NA non-coding downstream 42998 19353291 ~ 19353588 (+)
G375481 NA non-coding downstream 45581 19355874 ~ 19356118 (+)
G375485 NA non-coding downstream 65996 19376289 ~ 19376554 (+)
G375486 NA non-coding downstream 67153 19377446 ~ 19377709 (+)
G375488 NA non-coding downstream 68856 19379149 ~ 19379375 (+)
G373726 NA other upstream 1602147 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 2427719 16870434 ~ 16882185 (+)
G372373 NA other upstream 2571404 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3088971 16218328 ~ 16220933 (+)
G376320 NA other downstream 672968 19983261 ~ 19983848 (+)
G377022 NA other downstream 1281187 20591480 ~ 20596863 (+)
LOC110522817 LOC106568462 other downstream 1520965 20831111 ~ 20842676 (+)
LOC110523400 LOC106568542 other downstream 1797876 21108129 ~ 21160149 (+)

Expression


Co-expression Network