G375488


Basic Information

Item Value
gene id G375488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19379149 ~ 19379375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU426896
GTTTTATTCTCCACTTTTTCACGATTTAGTTGGAACATTCAAAAATGGCTGCGCCCTGTCGTGGCTGTTGACTAGTTTTACGCTGGATTTCCAAATGTCTAGCTAAGACGCATATTTCTTCTGACAAATGGACTATCGAGAAGTAAAAATATAATTATCTTGCCATCTCAATTCCCATTAGCTGTCCGACGTCTGGTTGTGTTTATAACAAACGAAACGAATTTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU426896 True 227 lncRNA 0.39 1 19379149 19379375

Neighbor

gene id symbol gene type direction distance location
LOC110523377 LOC106568724 coding upstream 15060 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 800921 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 873007 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 956891 18415774 ~ 18422258 (+)
LOC110523365 LOC106568911 coding upstream 969023 18396328 ~ 18410126 (+)
LOC110523383 LOC106568686 coding downstream 120229 19499604 ~ 19512291 (+)
LOC110523391 LOC106568645 coding downstream 672018 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 1011155 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 1128699 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 1451736 20831111 ~ 20842676 (+)
G375486 NA non-coding upstream 1440 19377446 ~ 19377709 (+)
G375485 NA non-coding upstream 2595 19376289 ~ 19376554 (+)
G375481 NA non-coding upstream 23031 19355874 ~ 19356118 (+)
G375477 NA non-coding upstream 25561 19353291 ~ 19353588 (+)
G375445 NA non-coding upstream 68856 19309904 ~ 19310293 (+)
G375491 NA non-coding downstream 4234 19383609 ~ 19383849 (+)
G375494 NA non-coding downstream 8988 19388363 ~ 19388589 (+)
G375610 NA non-coding downstream 14827 19394202 ~ 19394536 (+)
G375629 NA non-coding downstream 42753 19422128 ~ 19422768 (+)
G375696 NA non-coding downstream 96646 19476021 ~ 19476406 (+)
arhgef28a LOC106568988 other upstream 1295784 18067350 ~ 18177035 (+)
G373726 NA other upstream 1671392 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 2496964 16870434 ~ 16882185 (+)
G372373 NA other upstream 2640649 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3158216 16218328 ~ 16220933 (+)
G376320 NA other downstream 603886 19983261 ~ 19983848 (+)
G377022 NA other downstream 1212105 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1728794 21108129 ~ 21160149 (+)

Expression


Co-expression Network