G375817



Basic Information


Item Value
gene id G375817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19589895 ~ 19590137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU427280
tatatatatatatttgctgtGAAGACAAGGCAGATTAACTTTTTTAAGACCAGTACATACATGTGTATATCGATGatgagaaaataagtatttttaattAGTGTGAGCACTCGAAACCCCTTGGCGATAACCGTGTAATTTGAGTCGTTTTGTGAATATGAGCAATGTGTTGTTTGCTGGGATCAAACTAACAGAGGTGACAATTTTGTGATATCCtcagtatgtacagtggggcaaaacagt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU427280 True 243 lncRNA 0.35 1 19589895 19590137

Neighbor


gene id symbol gene type direction distance location
LOC110523382 prkaa1 coding downstream 9579 19561879 ~ 19580316 (-)
LOC110523384 LOC106568686 coding downstream 30141 19507723 ~ 19559754 (-)
LOC110523380 LOC106568716 coding downstream 161081 19396185 ~ 19428814 (-)
LOC110523379 LOC106568729 coding downstream 214660 19363387 ~ 19375235 (-)
LOC110523375 LOC106568736 coding downstream 254871 19214846 ~ 19335024 (-)
LOC110523387 LOC106562971 coding upstream 7 19590144 ~ 19618069 (-)
LOC110523381 LOC106568667 coding upstream 30888 19621025 ~ 19825534 (-)
LOC110523392 NA coding upstream 454106 20044243 ~ 20051842 (-)
LOC110523394 LOC100194676 coding upstream 1253254 20843391 ~ 20851224 (-)
LOC110523399 LOC106568557 coding upstream 1417788 21007681 ~ 21018966 (-)
G375815 NA non-coding downstream 1535 19524385 ~ 19588360 (-)
G375821 NA non-coding downstream 93437 19495942 ~ 19496458 (-)
G375720 NA non-coding downstream 100173 19489521 ~ 19489722 (-)
G375711 NA non-coding downstream 104521 19485149 ~ 19485374 (-)
G375683 NA non-coding downstream 123309 19466309 ~ 19466586 (-)
G376129 NA non-coding upstream 239100 19829237 ~ 19829453 (-)
G376241 NA non-coding upstream 323082 19913219 ~ 19913484 (-)
G376246 NA non-coding upstream 325054 19915191 ~ 19915408 (-)
G376283 NA non-coding upstream 356742 19946879 ~ 19947298 (-)
G374786 NA other downstream 1030728 18558140 ~ 18559167 (-)
G374189 NA other downstream 1586725 18002820 ~ 18003170 (-)
LOC110523354 LOC106569496 other downstream 2068408 17483696 ~ 17521507 (-)
G373228 LOC106569424 other downstream 2464088 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 2647704 16909582 ~ 16942359 (-)
G377800 NA other upstream 1103959 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 1114476 20704613 ~ 20705140 (-)
G377991 NA other upstream 1439321 21029458 ~ 21029783 (-)
G378359 NA other upstream 2201525 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 2587128 22177265 ~ 22179322 (-)

Expression



Co-expression Network