G376287


Basic Information

Item Value
gene id G376287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19950076 ~ 19950291 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427769
ttgggaggttcgtcagctacatgggaaacacctgggcccggtgtgtcccaggataaatacaccacttccccattcatggagaagactctctccatgcagacacctttatagattttgttgtgtatcttggtggccttttggttgtttgctttggcacctttcaacaccctgcattatcacattcatgcatgcaaaacactcacttacactactgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427769 True 216 lncRNA 0.46 1 19950076 19950291

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 441011 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 585987 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1371848 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1443934 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1527818 18415774 ~ 18422258 (+)
LOC110523391 LOC106568645 coding downstream 101102 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 440239 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 557783 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 880820 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 908051 20858342 ~ 20859762 (+)
G376267 NA non-coding upstream 23255 19926621 ~ 19926821 (+)
G376250 NA non-coding upstream 31920 19917851 ~ 19918156 (+)
G375980 NA non-coding upstream 137572 19805729 ~ 19812504 (+)
G375871 LOC106568667 non-coding upstream 327403 19621070 ~ 19622673 (+)
G376319 NA non-coding downstream 32502 19982793 ~ 19983038 (+)
G376321 LOC107579696 non-coding downstream 34360 19984651 ~ 19984987 (+)
G376322 NA non-coding downstream 36503 19986794 ~ 19987027 (+)
G376323 NA non-coding downstream 37221 19987512 ~ 19991060 (+)
G376326 NA non-coding downstream 42386 19992677 ~ 19993109 (+)
arhgef28a LOC106568988 other upstream 1866711 18067350 ~ 18177035 (+)
G373726 NA other upstream 2242319 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3067891 16870434 ~ 16882185 (+)
G372373 NA other upstream 3211576 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3729143 16218328 ~ 16220933 (+)
G376320 NA other downstream 32970 19983261 ~ 19983848 (+)
G377022 NA other downstream 641189 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1157878 21108129 ~ 21160149 (+)

Expression


Co-expression Network