G376319


Basic Information

Item Value
gene id G376319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19982793 ~ 19983038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427801
ctgtctttgtcagattctcgtttgtgttactcatgcctgaaccagactatcgtcgtgtttgctgcaaccttgtcctgtcctgtcggaatctgcctgttcatctaaccttgtcctgtcctgtcggaatctgcctgtccatctgagcctacgtgtgtttcgtcattaaagaaactctgttttgttaattcgcttttgggtcctcattcacgcacctgacagaagaatccgaccaagaatggacccagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427801 True 246 lncRNA 0.48 1 19982793 19983038

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 473728 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 618704 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1404565 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1476651 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1560535 18415774 ~ 18422258 (+)
LOC110523391 LOC106568645 coding downstream 68355 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 407492 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 525036 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 848073 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 875304 20858342 ~ 20859762 (+)
G376287 NA non-coding upstream 32502 19950076 ~ 19950291 (+)
G376267 NA non-coding upstream 55972 19926621 ~ 19926821 (+)
G376250 NA non-coding upstream 64637 19917851 ~ 19918156 (+)
G375980 NA non-coding upstream 170289 19805729 ~ 19812504 (+)
G375871 LOC106568667 non-coding upstream 360120 19621070 ~ 19622673 (+)
G376321 LOC107579696 non-coding downstream 1613 19984651 ~ 19984987 (+)
G376322 NA non-coding downstream 3756 19986794 ~ 19987027 (+)
G376323 NA non-coding downstream 4474 19987512 ~ 19991060 (+)
G376326 NA non-coding downstream 9639 19992677 ~ 19993109 (+)
G376330 NA non-coding downstream 15302 19998340 ~ 19998596 (+)
arhgef28a LOC106568988 other upstream 1899428 18067350 ~ 18177035 (+)
G373726 NA other upstream 2275036 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3100608 16870434 ~ 16882185 (+)
G372373 NA other upstream 3244293 16735642 ~ 16738500 (+)
G372281 LOC106569177 other upstream 3761860 16218328 ~ 16220933 (+)
G376320 NA other downstream 223 19983261 ~ 19983848 (+)
G377022 NA other downstream 608442 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1125131 21108129 ~ 21160149 (+)

Expression


Co-expression Network