G376322


Basic Information

Item Value
gene id G376322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19986794 ~ 19987027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427804
gctaataagcgtagaactaagagtcctagatattgtcgcggtcagagagtttggctctccactcagaaccttccccttaagacagcttctcgcaagttgaccccgcggttcattggtccgttccgtatttctcagatcattaatcctgtcgcagtgcgacttcttcttccgcgatatcttcgtcgcgtccacccggtcttccatgtctcctgtgttaagcccgttcttcgcgct

Function

NR:

description
PREDICTED: uncharacterized protein LOC107670948

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427804 True 234 lncRNA 0.51 1 19986794 19987027

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 477729 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 622705 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1408566 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1480652 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1564536 18415774 ~ 18422258 (+)
LOC110523391 LOC106568645 coding downstream 64366 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 403503 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 521047 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 844084 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 871315 20858342 ~ 20859762 (+)
G376321 LOC107579696 non-coding upstream 1807 19984651 ~ 19984987 (+)
G376319 NA non-coding upstream 3756 19982793 ~ 19983038 (+)
G376287 NA non-coding upstream 36503 19950076 ~ 19950291 (+)
G376267 NA non-coding upstream 59973 19926621 ~ 19926821 (+)
G376250 NA non-coding upstream 68638 19917851 ~ 19918156 (+)
G376323 NA non-coding downstream 485 19987512 ~ 19991060 (+)
G376326 NA non-coding downstream 5650 19992677 ~ 19993109 (+)
G376330 NA non-coding downstream 11313 19998340 ~ 19998596 (+)
G376454 NA non-coding downstream 201749 20188776 ~ 20189381 (+)
G376471 NA non-coding downstream 234909 20221936 ~ 20226766 (+)
G376320 NA other upstream 2946 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 1903429 18067350 ~ 18177035 (+)
G373726 NA other upstream 2279037 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3104609 16870434 ~ 16882185 (+)
G372373 NA other upstream 3248294 16735642 ~ 16738500 (+)
G377022 NA other downstream 604453 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1121142 21108129 ~ 21160149 (+)
G378660 NA other downstream 2185508 22172535 ~ 22231920 (+)

Expression


Co-expression Network