G376326


Basic Information

Item Value
gene id G376326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19992677 ~ 19993109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427815
ttccggattgactgaccttcatgtcttacagtaatgatggactgtcgtttatctttgcttatttgagctgttcttgcatgATATGgacatggtattttaccaaatcaaatcaaatcaaatcaaatcaaatagggctatcttctgtataccacctctaccttgtcacaacacaactgataggctcaaactcattaagaagggaagaaattacacaaataaaacatgttcactgaaatgcattccaggtgactacctcatgaagctggttgggagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctactttgaagcatctaaatgataaaatatacgtATTTAGGTTTGTTTAAAACttgttttgtttactacatgattccatgtgtgttattttatagttgtgatgtcttcactattattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427815 True 433 lncRNA 0.36 1 19992677 19993109

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 483612 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 628588 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1414449 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1486535 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1570419 18415774 ~ 18422258 (+)
LOC110523391 LOC106568645 coding downstream 58284 20051393 ~ 20381619 (+)
LOC110523393 LOC106568920 coding downstream 397421 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 514965 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 838002 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 865233 20858342 ~ 20859762 (+)
G376323 NA non-coding upstream 1617 19987512 ~ 19991060 (+)
G376322 NA non-coding upstream 5650 19986794 ~ 19987027 (+)
G376321 LOC107579696 non-coding upstream 7690 19984651 ~ 19984987 (+)
G376319 NA non-coding upstream 9639 19982793 ~ 19983038 (+)
G376287 NA non-coding upstream 42386 19950076 ~ 19950291 (+)
G376330 NA non-coding downstream 5231 19998340 ~ 19998596 (+)
G376454 NA non-coding downstream 195667 20188776 ~ 20189381 (+)
G376471 NA non-coding downstream 228827 20221936 ~ 20226766 (+)
G376499 NA non-coding downstream 273777 20266886 ~ 20267159 (+)
G376503 NA non-coding downstream 279549 20272658 ~ 20297610 (+)
G376320 NA other upstream 8829 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 1909312 18067350 ~ 18177035 (+)
G373726 NA other upstream 2284920 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3110492 16870434 ~ 16882185 (+)
G372373 NA other upstream 3254177 16735642 ~ 16738500 (+)
G377022 NA other downstream 598371 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 1115060 21108129 ~ 21160149 (+)
G378660 NA other downstream 2179426 22172535 ~ 22231920 (+)

Expression


Co-expression Network