G376454


Basic Information

Item Value
gene id G376454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20188776 ~ 20189381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427953
TAAcaagtaaaaataacatggctatatactgggagtaccagtaccgagtcactgtgcaggggtacgatgtaataacatggctatatactgggagtaccagtaccgagtcactgtgcaggggtacgatgtaataacatggctatatactgggagtaccagtaccgagtcactgtgcaggggtacgatgtaataacatgactatatacagggagtaccagtaccgagtcactgtgcaggggtacgatgtaataacatgactatatactgggagtaccagtaccgagtcactgtgcaggggtacgatgtaataacatgactatatactgggagtaccagtaccgagtcactgtgcaggggtacgatgtaATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427953 True 370 lncRNA 0.45 2 20188776 20189381

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 679711 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 824687 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1610548 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1682634 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1766518 18415774 ~ 18422258 (+)
LOC110523393 LOC106568920 coding downstream 201149 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 318693 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 641730 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 668961 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 692557 20881938 ~ 20897867 (+)
G376330 NA non-coding upstream 190180 19998340 ~ 19998596 (+)
G376326 NA non-coding upstream 195667 19992677 ~ 19993109 (+)
G376323 NA non-coding upstream 197716 19987512 ~ 19991060 (+)
G376322 NA non-coding upstream 201749 19986794 ~ 19987027 (+)
G376321 LOC107579696 non-coding upstream 203789 19984651 ~ 19984987 (+)
G376471 NA non-coding downstream 32555 20221936 ~ 20226766 (+)
G376499 NA non-coding downstream 77505 20266886 ~ 20267159 (+)
G376503 NA non-coding downstream 83277 20272658 ~ 20297610 (+)
G376536 NA non-coding downstream 121435 20310816 ~ 20335580 (+)
G376857 NA non-coding downstream 194645 20384026 ~ 20384324 (+)
G376320 NA other upstream 204928 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2105411 18067350 ~ 18177035 (+)
G373726 NA other upstream 2481019 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3306591 16870434 ~ 16882185 (+)
G372373 NA other upstream 3450276 16735642 ~ 16738500 (+)
G377022 NA other downstream 402099 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 918788 21108129 ~ 21160149 (+)
G378660 NA other downstream 1983154 22172535 ~ 22231920 (+)

Expression


Co-expression Network