G376499


Basic Information

Item Value
gene id G376499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20266886 ~ 20267159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU427999
CACAGACTGCACATGCCCCAGTTGCAATAAAGTTTGTGAATCTCGGTTTGGACTCAACAGTCACCAAAGGATTCACCGTTAACTCAGAAGTGGAAGTCATCATCGGATACTATGGGCTACCATAACGAACAGATATGTGTacatgtgcgtgcatgtgtgtgtgtctttctgtgttgTACAAAGCAGTAGAACATTCTATTGTTGTTATCAATAAATGTCACAATAAGGTAAAGAGCATTAGATTTTCCTGCTGGCAAAAACCATTGCATGTAcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU427999 True 274 lncRNA 0.41 1 20266886 20267159

Neighbor

gene id symbol gene type direction distance location
LOC110523383 LOC106568686 coding upstream 757821 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 902797 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1688658 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1760744 18487620 ~ 18506142 (+)
LOC110523366 nsa2 coding upstream 1844628 18415774 ~ 18422258 (+)
LOC110523393 LOC106568920 coding downstream 123371 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 240915 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 563952 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 591183 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 614779 20881938 ~ 20897867 (+)
G376471 NA non-coding upstream 40120 20221936 ~ 20226766 (+)
G376454 NA non-coding upstream 77505 20188776 ~ 20189381 (+)
G376330 NA non-coding upstream 268290 19998340 ~ 19998596 (+)
G376326 NA non-coding upstream 273777 19992677 ~ 19993109 (+)
G376323 NA non-coding upstream 275826 19987512 ~ 19991060 (+)
G376503 NA non-coding downstream 5499 20272658 ~ 20297610 (+)
G376536 NA non-coding downstream 43657 20310816 ~ 20335580 (+)
G376857 NA non-coding downstream 116867 20384026 ~ 20384324 (+)
G376859 NA non-coding downstream 120121 20387280 ~ 20387705 (+)
G376862 NA non-coding downstream 121106 20388265 ~ 20388600 (+)
G376320 NA other upstream 283038 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2183521 18067350 ~ 18177035 (+)
G373726 NA other upstream 2559129 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3384701 16870434 ~ 16882185 (+)
G372373 NA other upstream 3528386 16735642 ~ 16738500 (+)
G377022 NA other downstream 324321 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 841010 21108129 ~ 21160149 (+)
G378660 NA other downstream 1905376 22172535 ~ 22231920 (+)

Expression


Co-expression Network