G376862


Basic Information

Item Value
gene id G376862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20388265 ~ 20388600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428380
gcaattgccagctgcttctactttaccatttgattcaggggagaaagcatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagttcgcgttttgaggactgaattttcggattttttttggcagccaaatgtgatgtataaaacggagctatttctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgatttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428380 True 336 lncRNA 0.35 1 20388265 20388600

Neighbor

gene id symbol gene type direction distance location
LOC110523391 LOC106568645 coding upstream 6646 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 879200 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1024176 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1810037 18558152 ~ 18578228 (+)
egfl7 LOC106568866 coding upstream 1882123 18487620 ~ 18506142 (+)
LOC110523393 LOC106568920 coding downstream 1930 20390530 ~ 20414156 (+)
LOC110522816 LOC106568602 coding downstream 119474 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 442511 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 469742 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 493338 20881938 ~ 20897867 (+)
G376859 NA non-coding upstream 560 20387280 ~ 20387705 (+)
G376857 NA non-coding upstream 3941 20384026 ~ 20384324 (+)
G376536 NA non-coding upstream 52685 20310816 ~ 20335580 (+)
G376503 NA non-coding upstream 90655 20272658 ~ 20297610 (+)
G376499 NA non-coding upstream 121106 20266886 ~ 20267159 (+)
G376864 NA non-coding downstream 905 20389505 ~ 20389755 (+)
G376867 NA non-coding downstream 32330 20420930 ~ 20421730 (+)
G376938 NA non-coding downstream 72404 20461004 ~ 20461340 (+)
G376972 NA non-coding downstream 115421 20504021 ~ 20504333 (+)
G376976 NA non-coding downstream 124203 20512803 ~ 20513129 (+)
G376320 NA other upstream 404417 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2304900 18067350 ~ 18177035 (+)
G373726 NA other upstream 2680508 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3506080 16870434 ~ 16882185 (+)
G372373 NA other upstream 3649765 16735642 ~ 16738500 (+)
G377022 NA other downstream 202880 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 719569 21108129 ~ 21160149 (+)
G378660 NA other downstream 1783935 22172535 ~ 22231920 (+)

Expression


Co-expression Network