Gene
RNA
| Item | Value |
|---|---|
| gene id | G376887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20419040 ~ 20419373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428406 | True | 334 | lncRNA | 0.36 | 1 | 20419040 | 20419373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523392 | NA | coding | downstream | 367198 | 20044243 ~ 20051842 (-) |
| LOC110523381 | LOC106568667 | coding | downstream | 593506 | 19621025 ~ 19825534 (-) |
| LOC110523387 | LOC106562971 | coding | downstream | 800971 | 19590144 ~ 19618069 (-) |
| LOC110523382 | prkaa1 | coding | downstream | 838724 | 19561879 ~ 19580316 (-) |
| LOC110523384 | LOC106568686 | coding | downstream | 859286 | 19507723 ~ 19559754 (-) |
| LOC110523394 | LOC100194676 | coding | upstream | 424018 | 20843391 ~ 20851224 (-) |
| LOC110523399 | LOC106568557 | coding | upstream | 588552 | 21007681 ~ 21018966 (-) |
| LOC110522820 | LOC105889199 | coding | upstream | 740908 | 21160281 ~ 21162494 (-) |
| LOC110523403 | ubb | coding | upstream | 753271 | 21172644 ~ 21175591 (-) |
| tpst2 | LOC106568446 | coding | upstream | 756775 | 21176148 ~ 21182983 (-) |
| G376886 | NA | non-coding | downstream | 116 | 20418534 ~ 20418924 (-) |
| G376865 | NA | non-coding | downstream | 29103 | 20389722 ~ 20389937 (-) |
| G376860 | NA | non-coding | downstream | 33460 | 20385378 ~ 20385580 (-) |
| G376858 | NA | non-coding | downstream | 34467 | 20384246 ~ 20384573 (-) |
| G376856 | NA | non-coding | downstream | 35273 | 20383551 ~ 20383767 (-) |
| G376888 | NA | non-coding | upstream | 772 | 20420145 ~ 20420579 (-) |
| G376892 | NA | non-coding | upstream | 4596 | 20423969 ~ 20424169 (-) |
| G377669 | NA | non-coding | upstream | 58270 | 20477643 ~ 20477870 (-) |
| G377687 | NA | non-coding | upstream | 82435 | 20501808 ~ 20502085 (-) |
| G377694 | NA | non-coding | upstream | 101339 | 20520712 ~ 20520914 (-) |
| G374786 | NA | other | downstream | 1859873 | 18558140 ~ 18559167 (-) |
| G374189 | NA | other | downstream | 2415870 | 18002820 ~ 18003170 (-) |
| LOC110523354 | LOC106569496 | other | downstream | 2897553 | 17483696 ~ 17521507 (-) |
| G373228 | LOC106569424 | other | downstream | 3293233 | 17124037 ~ 17125807 (-) |
| LOC110523341 | LOC106569324 | other | downstream | 3476849 | 16909582 ~ 16942359 (-) |
| G377800 | NA | other | upstream | 274723 | 20694096 ~ 20694708 (-) |
| G377809 | LOC106568602 | other | upstream | 285240 | 20704613 ~ 20705140 (-) |
| G377991 | NA | other | upstream | 610085 | 21029458 ~ 21029783 (-) |
| G378359 | NA | other | upstream | 1372289 | 21791662 ~ 21791993 (-) |
| LOC110523434 | LOC106567989 | other | upstream | 1757892 | 22177265 ~ 22179322 (-) |
