G376938


Basic Information

Item Value
gene id G376938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20461004 ~ 20461340 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428457
gctagatgcagtcaagagtgtgcaaggcagtttgaatgtgtcactgtctgtcaccttgattactcacatTTTTCTCTAGACCTGTGCACCTTCGCTGTAAACTTCCATTCATAAGCTGCTGTAGGTTGTAGCAAGCTCATGATGCGTACAGGGAAAATATGAGTATCATGTAATagtctaaacctatcgatgttacattgagctgggtgaatggaatatgaatgacagtcattcaatatgctgtaatagaaaaaaggccatgctcattaaataataattgtccttcctcatcttaaacggcacagACCTCCACTGTGAAGCGTATGTGGTGCTGTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428457 True 337 lncRNA 0.41 1 20461004 20461340

Neighbor

gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 46848 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 79385 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 951939 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1096915 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1882776 18558152 ~ 18578228 (+)
LOC110522816 LOC106568602 coding downstream 46734 20508074 ~ 20759255 (+)
LOC110522817 LOC106568462 coding downstream 369771 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 397002 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 420598 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 436781 20898121 ~ 20910637 (+)
G376867 NA non-coding upstream 39274 20420930 ~ 20421730 (+)
G376864 NA non-coding upstream 71249 20389505 ~ 20389755 (+)
G376862 NA non-coding upstream 72404 20388265 ~ 20388600 (+)
G376859 NA non-coding upstream 73299 20387280 ~ 20387705 (+)
G376857 NA non-coding upstream 76680 20384026 ~ 20384324 (+)
G376972 NA non-coding downstream 42681 20504021 ~ 20504333 (+)
G376976 NA non-coding downstream 51463 20512803 ~ 20513129 (+)
G376978 NA non-coding downstream 53401 20514741 ~ 20514942 (+)
G376983 NA non-coding downstream 59872 20521212 ~ 20521465 (+)
G376999 NA non-coding downstream 105952 20567292 ~ 20567543 (+)
G376320 NA other upstream 477156 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2377639 18067350 ~ 18177035 (+)
G373726 NA other upstream 2753247 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3578819 16870434 ~ 16882185 (+)
G372373 NA other upstream 3722504 16735642 ~ 16738500 (+)
G377022 NA other downstream 130140 20591480 ~ 20596863 (+)
LOC110523400 LOC106568542 other downstream 646829 21108129 ~ 21160149 (+)
G378660 NA other downstream 1711195 22172535 ~ 22231920 (+)

Expression


Co-expression Network