G376983



Basic Information


Item Value
gene id G376983
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20521212 ~ 20521465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU428502
agATAAAACAacagatatcaaatcaaatttatttataaagcccttcttagatcagctgatatctcaaaatgatggacagaaacccagcctaaaaccccaaacagcaagaaatgcaggtgcagaagcacggtggctaggaaatactccctagaaaggccaaaacctaggaacaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggcca

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU428502 True 254 lncRNA 0.44 1 20521212 20521465

Neighbor


gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 107056 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 139593 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1012147 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1157123 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 1942984 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 309646 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 336877 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 360473 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 376656 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 401549 20923014 ~ 20944043 (+)
G376978 NA non-coding upstream 6270 20514741 ~ 20514942 (+)
G376976 NA non-coding upstream 8083 20512803 ~ 20513129 (+)
G376972 NA non-coding upstream 16879 20504021 ~ 20504333 (+)
G376938 NA non-coding upstream 59872 20461004 ~ 20461340 (+)
G376867 NA non-coding upstream 99482 20420930 ~ 20421730 (+)
G376999 NA non-coding downstream 45827 20567292 ~ 20567543 (+)
G377004 NA non-coding downstream 50942 20572407 ~ 20573061 (+)
G377057 NA non-coding downstream 117733 20639198 ~ 20639463 (+)
G377062 NA non-coding downstream 126443 20647908 ~ 20648189 (+)
G377063 NA non-coding downstream 127572 20649037 ~ 20649329 (+)
G376320 NA other upstream 537364 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2437847 18067350 ~ 18177035 (+)
G373726 NA other upstream 2813455 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3639027 16870434 ~ 16882185 (+)
G372373 NA other upstream 3782712 16735642 ~ 16738500 (+)
G377022 NA other downstream 70015 20591480 ~ 20596863 (+)
LOC110522816 LOC106568602 other downstream 222119 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 586704 21108129 ~ 21160149 (+)
G378660 NA other downstream 1651070 22172535 ~ 22231920 (+)

Expression



Co-expression Network