Gene
RNA
| Item | Value |
|---|---|
| gene id | G376999 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20567292 ~ 20567543 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428518 | True | 252 | lncRNA | 0.48 | 1 | 20567292 | 20567543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523393 | LOC106568920 | coding | upstream | 153136 | 20390530 ~ 20414156 (+) |
| LOC110523391 | LOC106568645 | coding | upstream | 185673 | 20051393 ~ 20381619 (+) |
| LOC110523383 | LOC106568686 | coding | upstream | 1058227 | 19499604 ~ 19512291 (+) |
| LOC110523377 | LOC106568724 | coding | upstream | 1203203 | 19358271 ~ 19364089 (+) |
| LOC110523370 | fa69b | coding | upstream | 1989064 | 18558152 ~ 18578228 (+) |
| LOC110522817 | LOC106568462 | coding | downstream | 263568 | 20831111 ~ 20842676 (+) |
| pnx | LOC106568480 | coding | downstream | 290799 | 20858342 ~ 20859762 (+) |
| LOC110522818 | LOC106568484 | coding | downstream | 314395 | 20881938 ~ 20897867 (+) |
| LOC110523395 | LOC106568500 | coding | downstream | 330578 | 20898121 ~ 20910637 (+) |
| ccar2 | LOC106568504 | coding | downstream | 355471 | 20923014 ~ 20944043 (+) |
| G376983 | NA | non-coding | upstream | 45827 | 20521212 ~ 20521465 (+) |
| G376978 | NA | non-coding | upstream | 52350 | 20514741 ~ 20514942 (+) |
| G376976 | NA | non-coding | upstream | 54163 | 20512803 ~ 20513129 (+) |
| G376972 | NA | non-coding | upstream | 62959 | 20504021 ~ 20504333 (+) |
| G376938 | NA | non-coding | upstream | 105952 | 20461004 ~ 20461340 (+) |
| G377004 | NA | non-coding | downstream | 4864 | 20572407 ~ 20573061 (+) |
| G377057 | NA | non-coding | downstream | 71655 | 20639198 ~ 20639463 (+) |
| G377062 | NA | non-coding | downstream | 80365 | 20647908 ~ 20648189 (+) |
| G377063 | NA | non-coding | downstream | 81494 | 20649037 ~ 20649329 (+) |
| G377065 | NA | non-coding | downstream | 84289 | 20651832 ~ 20652071 (+) |
| G376320 | NA | other | upstream | 583444 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 2483927 | 18067350 ~ 18177035 (+) |
| G373726 | NA | other | upstream | 2859535 | 17704113 ~ 17707757 (+) |
| G372618 | LOC105030512 | other | upstream | 3685107 | 16870434 ~ 16882185 (+) |
| G372373 | NA | other | upstream | 3828792 | 16735642 ~ 16738500 (+) |
| G377022 | NA | other | downstream | 23937 | 20591480 ~ 20596863 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 176041 | 20508074 ~ 20759255 (+) |
| LOC110523400 | LOC106568542 | other | downstream | 540626 | 21108129 ~ 21160149 (+) |
| G378660 | NA | other | downstream | 1604992 | 22172535 ~ 22231920 (+) |
