G377057


Basic Information

Item Value
gene id G377057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20639198 ~ 20639463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428580
gtgaatacttttgcaaggcattgtatatgcatcagcaaccacagctgatgaagtcactgaaacccttaacaaatagTTTTGGAATGAGtgaccagtaataaactggtcctgaacatctctaaaactaaaagcattgtatttggtacaatcATTCCCTAAGTCCTAGACCTCAGCTGAacctggtaatgaatggtgtggctgttgattgtaaactgtcatggtcaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428580 True 227 lncRNA 0.39 2 20639198 20639463

Neighbor

gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 225042 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 257579 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1130133 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1275109 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 2060970 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 191648 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 218879 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 242475 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 258658 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 283551 20923014 ~ 20944043 (+)
G377004 NA non-coding upstream 66137 20572407 ~ 20573061 (+)
G376999 NA non-coding upstream 71655 20567292 ~ 20567543 (+)
G376983 NA non-coding upstream 117733 20521212 ~ 20521465 (+)
G376978 NA non-coding upstream 124256 20514741 ~ 20514942 (+)
G376976 NA non-coding upstream 126069 20512803 ~ 20513129 (+)
G377062 NA non-coding downstream 8445 20647908 ~ 20648189 (+)
G377063 NA non-coding downstream 9574 20649037 ~ 20649329 (+)
G377065 NA non-coding downstream 12369 20651832 ~ 20652071 (+)
G377071 NA non-coding downstream 21889 20661352 ~ 20661558 (+)
G377078 NA non-coding downstream 27584 20667047 ~ 20667366 (+)
G377022 NA other upstream 42335 20591480 ~ 20596863 (+)
G376320 NA other upstream 655350 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2555833 18067350 ~ 18177035 (+)
G373726 NA other upstream 2931441 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3757013 16870434 ~ 16882185 (+)
LOC110522816 LOC106568602 other downstream 104121 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 468706 21108129 ~ 21160149 (+)
G378660 NA other downstream 1533072 22172535 ~ 22231920 (+)
G378832 NA other downstream 1864289 22503752 ~ 22506270 (+)

Expression


Co-expression Network