Gene
RNA
| Item | Value |
|---|---|
| gene id | G377062 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20647908 ~ 20648189 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428586 | True | 282 | lncRNA | 0.41 | 1 | 20647908 | 20648189 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523393 | LOC106568920 | coding | upstream | 233752 | 20390530 ~ 20414156 (+) |
| LOC110523391 | LOC106568645 | coding | upstream | 266289 | 20051393 ~ 20381619 (+) |
| LOC110523383 | LOC106568686 | coding | upstream | 1138843 | 19499604 ~ 19512291 (+) |
| LOC110523377 | LOC106568724 | coding | upstream | 1283819 | 19358271 ~ 19364089 (+) |
| LOC110523370 | fa69b | coding | upstream | 2069680 | 18558152 ~ 18578228 (+) |
| LOC110522817 | LOC106568462 | coding | downstream | 182922 | 20831111 ~ 20842676 (+) |
| pnx | LOC106568480 | coding | downstream | 210153 | 20858342 ~ 20859762 (+) |
| LOC110522818 | LOC106568484 | coding | downstream | 233749 | 20881938 ~ 20897867 (+) |
| LOC110523395 | LOC106568500 | coding | downstream | 249932 | 20898121 ~ 20910637 (+) |
| ccar2 | LOC106568504 | coding | downstream | 274825 | 20923014 ~ 20944043 (+) |
| G377057 | NA | non-coding | upstream | 8445 | 20639198 ~ 20639463 (+) |
| G377004 | NA | non-coding | upstream | 74847 | 20572407 ~ 20573061 (+) |
| G376999 | NA | non-coding | upstream | 80365 | 20567292 ~ 20567543 (+) |
| G376983 | NA | non-coding | upstream | 126443 | 20521212 ~ 20521465 (+) |
| G376978 | NA | non-coding | upstream | 132966 | 20514741 ~ 20514942 (+) |
| G377063 | NA | non-coding | downstream | 848 | 20649037 ~ 20649329 (+) |
| G377065 | NA | non-coding | downstream | 3643 | 20651832 ~ 20652071 (+) |
| G377071 | NA | non-coding | downstream | 13163 | 20661352 ~ 20661558 (+) |
| G377078 | NA | non-coding | downstream | 18858 | 20667047 ~ 20667366 (+) |
| G377081 | NA | non-coding | downstream | 27059 | 20675248 ~ 20675448 (+) |
| G377022 | NA | other | upstream | 51045 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 664060 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 2564543 | 18067350 ~ 18177035 (+) |
| G373726 | NA | other | upstream | 2940151 | 17704113 ~ 17707757 (+) |
| G372618 | LOC105030512 | other | upstream | 3765723 | 16870434 ~ 16882185 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 95395 | 20508074 ~ 20759255 (+) |
| LOC110523400 | LOC106568542 | other | downstream | 459980 | 21108129 ~ 21160149 (+) |
| G378660 | NA | other | downstream | 1524346 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1855563 | 22503752 ~ 22506270 (+) |
