G377065


Basic Information

Item Value
gene id G377065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20651832 ~ 20652071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428589
ctttatttaactaattatgtgactgctgaaggtaattggttgcaccagatcttattaaGGGGCTTCATTGCCAAGGGGTTGAATACACTCTTCCGTTGTTGTTCTTTTgttgaaacaagtcattttttaaatttcacttcactaatatggactattttgtgtatgtccgttacatgaaatccaaataaaaatctatttaaagtTCATGttttaatgcaacaaaataggaaaagaaCCAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428589 True 240 lncRNA 0.32 1 20651832 20652071

Neighbor

gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 237676 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 270213 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1142767 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1287743 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 2073604 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 179040 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 206271 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 229867 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 246050 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 270943 20923014 ~ 20944043 (+)
G377063 NA non-coding upstream 2503 20649037 ~ 20649329 (+)
G377062 NA non-coding upstream 3643 20647908 ~ 20648189 (+)
G377057 NA non-coding upstream 12369 20639198 ~ 20639463 (+)
G377004 NA non-coding upstream 78771 20572407 ~ 20573061 (+)
G376999 NA non-coding upstream 84289 20567292 ~ 20567543 (+)
G377071 NA non-coding downstream 9281 20661352 ~ 20661558 (+)
G377078 NA non-coding downstream 14976 20667047 ~ 20667366 (+)
G377081 NA non-coding downstream 23177 20675248 ~ 20675448 (+)
G377084 NA non-coding downstream 28427 20680498 ~ 20680786 (+)
G377091 NA non-coding downstream 32042 20684113 ~ 20684315 (+)
G377022 NA other upstream 54969 20591480 ~ 20596863 (+)
G376320 NA other upstream 667984 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2568467 18067350 ~ 18177035 (+)
G373726 NA other upstream 2944075 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3769647 16870434 ~ 16882185 (+)
LOC110522816 LOC106568602 other downstream 91513 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 456098 21108129 ~ 21160149 (+)
G378660 NA other downstream 1520464 22172535 ~ 22231920 (+)
G378832 NA other downstream 1851681 22503752 ~ 22506270 (+)

Expression


Co-expression Network