G377084


Basic Information

Item Value
gene id G377084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20680498 ~ 20680786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428609
aggtagtatgtacatgaatgtatagttaaagtgactatgcttatatgataaacagagagtagcagcagcataaaagaggggttggagcggaacacaatgtaaatagtcctggtagccatttgattacctgttcaggagtcttataagccataagactcctgaacaggtaatcaaatggctaccaggactattgggggtaaaaactgttgagaagccttcttgtcctagacttggcactccggtacagcttgccatgcggtagtagagagaacagtctatgactggggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428609 True 289 lncRNA 0.43 1 20680498 20680786

Neighbor

gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 266342 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 298879 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1171433 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1316409 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 2102270 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 150325 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 177556 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 201152 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 217335 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 242228 20923014 ~ 20944043 (+)
G377081 NA non-coding upstream 5050 20675248 ~ 20675448 (+)
G377078 NA non-coding upstream 13132 20667047 ~ 20667366 (+)
G377071 NA non-coding upstream 18940 20661352 ~ 20661558 (+)
G377065 NA non-coding upstream 28427 20651832 ~ 20652071 (+)
G377063 NA non-coding upstream 31169 20649037 ~ 20649329 (+)
G377091 NA non-coding downstream 3327 20684113 ~ 20684315 (+)
G377099 NA non-coding downstream 16408 20697194 ~ 20702214 (+)
G377105 NA non-coding downstream 24905 20705691 ~ 20705897 (+)
G377106 NA non-coding downstream 28137 20708923 ~ 20709145 (+)
G377107 NA non-coding downstream 28737 20709523 ~ 20742643 (+)
G377022 NA other upstream 83635 20591480 ~ 20596863 (+)
G376320 NA other upstream 696650 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2597133 18067350 ~ 18177035 (+)
G373726 NA other upstream 2972741 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3798313 16870434 ~ 16882185 (+)
LOC110522816 LOC106568602 other downstream 62798 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 427383 21108129 ~ 21160149 (+)
G378660 NA other downstream 1491749 22172535 ~ 22231920 (+)
G378832 NA other downstream 1822966 22503752 ~ 22506270 (+)

Expression


Co-expression Network