G377091


Basic Information

Item Value
gene id G377091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20684113 ~ 20684315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428616
TTCTTCCTCAGCACAGCATGGTCCACCAGTCACTaagttctccctctctgtttccacATTCAGAGGAACTACAACAACACCATCTACAAAACATTTGATTGAAAGGGAATGTATGTGGTGGCTAGTGAGAGGAGCTATAGGAAGACAGGCTtattataatgtctggaatggaataaatggaacggtataaaacacatgaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428616 True 203 lncRNA 0.41 1 20684113 20684315

Neighbor

gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 269957 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 302494 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1175048 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1320024 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 2105885 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 146796 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 174027 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 197623 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 213806 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 238699 20923014 ~ 20944043 (+)
G377084 NA non-coding upstream 3327 20680498 ~ 20680786 (+)
G377081 NA non-coding upstream 8665 20675248 ~ 20675448 (+)
G377078 NA non-coding upstream 16747 20667047 ~ 20667366 (+)
G377071 NA non-coding upstream 22555 20661352 ~ 20661558 (+)
G377065 NA non-coding upstream 32042 20651832 ~ 20652071 (+)
G377099 NA non-coding downstream 12879 20697194 ~ 20702214 (+)
G377105 NA non-coding downstream 21376 20705691 ~ 20705897 (+)
G377106 NA non-coding downstream 24608 20708923 ~ 20709145 (+)
G377107 NA non-coding downstream 25208 20709523 ~ 20742643 (+)
G377125 NA non-coding downstream 75431 20759746 ~ 20760485 (+)
G377022 NA other upstream 87250 20591480 ~ 20596863 (+)
G376320 NA other upstream 700265 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2600748 18067350 ~ 18177035 (+)
G373726 NA other upstream 2976356 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3801928 16870434 ~ 16882185 (+)
LOC110522816 LOC106568602 other downstream 59269 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 423854 21108129 ~ 21160149 (+)
G378660 NA other downstream 1488220 22172535 ~ 22231920 (+)
G378832 NA other downstream 1819437 22503752 ~ 22506270 (+)

Expression


Co-expression Network