G377105



Basic Information


Item Value
gene id G377105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20705691 ~ 20705897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU428631
gggttgtgaagctcagagatgtttgggatgggttgtgaagctcagagatgtttgggatggattgtgaagctcagagatgtttgggatgggttgtgaagctcagagatgtttgggatgggttgtgaagctcagagatgtttgggatgggttgtaaagctcagagatgtttgggatgggttgtaaagctcagagatgtttgggatgggt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU428631 True 207 lncRNA 0.47 1 20705691 20705897

Neighbor


gene id symbol gene type direction distance location
LOC110523393 LOC106568920 coding upstream 291535 20390530 ~ 20414156 (+)
LOC110523391 LOC106568645 coding upstream 324072 20051393 ~ 20381619 (+)
LOC110523383 LOC106568686 coding upstream 1196626 19499604 ~ 19512291 (+)
LOC110523377 LOC106568724 coding upstream 1341602 19358271 ~ 19364089 (+)
LOC110523370 fa69b coding upstream 2127463 18558152 ~ 18578228 (+)
LOC110522817 LOC106568462 coding downstream 125214 20831111 ~ 20842676 (+)
pnx LOC106568480 coding downstream 152445 20858342 ~ 20859762 (+)
LOC110522818 LOC106568484 coding downstream 176041 20881938 ~ 20897867 (+)
LOC110523395 LOC106568500 coding downstream 192224 20898121 ~ 20910637 (+)
ccar2 LOC106568504 coding downstream 217117 20923014 ~ 20944043 (+)
G377099 NA non-coding upstream 3477 20697194 ~ 20702214 (+)
G377091 NA non-coding upstream 21376 20684113 ~ 20684315 (+)
G377084 NA non-coding upstream 24905 20680498 ~ 20680786 (+)
G377081 NA non-coding upstream 30243 20675248 ~ 20675448 (+)
G377078 NA non-coding upstream 38325 20667047 ~ 20667366 (+)
G377106 NA non-coding downstream 3026 20708923 ~ 20709145 (+)
G377107 NA non-coding downstream 3626 20709523 ~ 20742643 (+)
G377125 NA non-coding downstream 53849 20759746 ~ 20760485 (+)
G377143 LOC100194676 non-coding downstream 94164 20800061 ~ 20846940 (+)
G377144 LOC100194676 non-coding downstream 143757 20849654 ~ 20851140 (+)
G377022 NA other upstream 108828 20591480 ~ 20596863 (+)
G376320 NA other upstream 721843 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2622326 18067350 ~ 18177035 (+)
G373726 NA other upstream 2997934 17704113 ~ 17707757 (+)
G372618 LOC105030512 other upstream 3823506 16870434 ~ 16882185 (+)
LOC110522816 LOC106568602 other downstream 37687 20508074 ~ 20759255 (+)
LOC110523400 LOC106568542 other downstream 402272 21108129 ~ 21160149 (+)
G378660 NA other downstream 1466638 22172535 ~ 22231920 (+)
G378832 NA other downstream 1797855 22503752 ~ 22506270 (+)

Expression



Co-expression Network