Gene
RNA
| Item | Value |
|---|---|
| gene id | G377107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20709523 ~ 20742643 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU428633 | True | 279 | lncRNA | 0.45 | 2 | 20709523 | 20742643 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523393 | LOC106568920 | coding | upstream | 295367 | 20390530 ~ 20414156 (+) |
| LOC110523391 | LOC106568645 | coding | upstream | 327904 | 20051393 ~ 20381619 (+) |
| LOC110523383 | LOC106568686 | coding | upstream | 1200458 | 19499604 ~ 19512291 (+) |
| LOC110523377 | LOC106568724 | coding | upstream | 1345434 | 19358271 ~ 19364089 (+) |
| LOC110523370 | fa69b | coding | upstream | 2131295 | 18558152 ~ 18578228 (+) |
| LOC110522817 | LOC106568462 | coding | downstream | 88468 | 20831111 ~ 20842676 (+) |
| pnx | LOC106568480 | coding | downstream | 115699 | 20858342 ~ 20859762 (+) |
| LOC110522818 | LOC106568484 | coding | downstream | 139295 | 20881938 ~ 20897867 (+) |
| LOC110523395 | LOC106568500 | coding | downstream | 155478 | 20898121 ~ 20910637 (+) |
| ccar2 | LOC106568504 | coding | downstream | 180371 | 20923014 ~ 20944043 (+) |
| G377106 | NA | non-coding | upstream | 378 | 20708923 ~ 20709145 (+) |
| G377105 | NA | non-coding | upstream | 3626 | 20705691 ~ 20705897 (+) |
| G377099 | NA | non-coding | upstream | 7309 | 20697194 ~ 20702214 (+) |
| G377091 | NA | non-coding | upstream | 25208 | 20684113 ~ 20684315 (+) |
| G377084 | NA | non-coding | upstream | 28737 | 20680498 ~ 20680786 (+) |
| G377125 | NA | non-coding | downstream | 17103 | 20759746 ~ 20760485 (+) |
| G377143 | LOC100194676 | non-coding | downstream | 57418 | 20800061 ~ 20846940 (+) |
| G377144 | LOC100194676 | non-coding | downstream | 107011 | 20849654 ~ 20851140 (+) |
| G377186 | NA | non-coding | downstream | 171509 | 20914152 ~ 20914533 (+) |
| G377195 | NA | non-coding | downstream | 174544 | 20917187 ~ 20917779 (+) |
| G377022 | NA | other | upstream | 112660 | 20591480 ~ 20596863 (+) |
| G376320 | NA | other | upstream | 725675 | 19983261 ~ 19983848 (+) |
| arhgef28a | LOC106568988 | other | upstream | 2626158 | 18067350 ~ 18177035 (+) |
| G373726 | NA | other | upstream | 3001766 | 17704113 ~ 17707757 (+) |
| G372618 | LOC105030512 | other | upstream | 3827338 | 16870434 ~ 16882185 (+) |
| LOC110522816 | LOC106568602 | other | downstream | 941 | 20508074 ~ 20759255 (+) |
| LOC110523400 | LOC106568542 | other | downstream | 365526 | 21108129 ~ 21160149 (+) |
| G378660 | NA | other | downstream | 1429892 | 22172535 ~ 22231920 (+) |
| G378832 | NA | other | downstream | 1761109 | 22503752 ~ 22506270 (+) |
