G377198



Basic Information


Item Value
gene id G377198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 20921877 ~ 20922095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU428741
ataacaaatactcagatgaaacatattgtgctatttatcacagactactttgtgtcaaagtttaacaaggactctcctcctctctagtgtcatgatcaaagatatgatcaacagcctcacatacagtatatcgtttggtaattgtgctgccacagaatgaattgtgagcaaggcctcaaaaaagctttatataccagagctgcaaGAACatttctatat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU428741 True 219 lncRNA 0.36 1 20921877 20922095

Neighbor


gene id symbol gene type direction distance location
LOC110523395 LOC106568500 coding upstream 11240 20898121 ~ 20910637 (+)
LOC110522818 LOC106568484 coding upstream 24010 20881938 ~ 20897867 (+)
pnx LOC106568480 coding upstream 62115 20858342 ~ 20859762 (+)
LOC110522817 LOC106568462 coding upstream 79201 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 coding upstream 162622 20508074 ~ 20759255 (+)
ccar2 LOC106568504 coding downstream 919 20923014 ~ 20944043 (+)
LOC110523398 LOC100534606 coding downstream 30054 20952149 ~ 20991376 (+)
LOC110522819 LOC106568526 coding downstream 128841 21050936 ~ 21099289 (+)
LOC110523400 LOC106568542 coding downstream 186034 21108129 ~ 21160149 (+)
npm2b LOC106592477 coding downstream 355473 21277568 ~ 21288531 (+)
G377197 NA non-coding upstream 519 20921135 ~ 20921358 (+)
G377195 NA non-coding upstream 4098 20917187 ~ 20917779 (+)
G377186 NA non-coding upstream 7344 20914152 ~ 20914533 (+)
G377144 LOC100194676 non-coding upstream 70737 20849654 ~ 20851140 (+)
G377143 LOC100194676 non-coding upstream 74937 20800061 ~ 20846940 (+)
G377188 LOC106581475 non-coding downstream 24434 20946529 ~ 20992976 (+)
G377184 NA non-coding downstream 71610 20993705 ~ 20996708 (+)
G377240 NA non-coding downstream 97567 21019662 ~ 21019907 (+)
G377241 NA non-coding downstream 100610 21022705 ~ 21023369 (+)
G377022 NA other upstream 325014 20591480 ~ 20596863 (+)
G376320 NA other upstream 938029 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2838512 18067350 ~ 18177035 (+)
G378660 NA other downstream 1250440 22172535 ~ 22231920 (+)
G378832 NA other downstream 1581657 22503752 ~ 22506270 (+)
G378868 NA other downstream 1680015 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 2020197 22942205 ~ 23007315 (+)

Expression



Co-expression Network