G377272



Basic Information


Item Value
gene id G377272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21071374 ~ 21071582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU428824
ggagatgatcgtggacttcaggaaacagcaaagggagcacccccctatccacatcgacgggacagcattTGAGAAGGTGGaagctgaaatggtccacccacacagacagtgtggtgaaggcggtgcaacagcgcttcttcaacctcaggagtctgacgaaatttggcttgtcaccttaaaccctcacaaacttttacagatgcacatcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU428824 True 209 lncRNA 0.51 1 21071374 21071582

Neighbor


gene id symbol gene type direction distance location
LOC110523398 LOC100534606 coding upstream 79998 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 127331 20923014 ~ 20944043 (+)
LOC110523395 LOC106568500 coding upstream 160737 20898121 ~ 20910637 (+)
LOC110522818 LOC106568484 coding upstream 173507 20881938 ~ 20897867 (+)
pnx LOC106568480 coding upstream 211612 20858342 ~ 20859762 (+)
LOC110523400 LOC106568542 coding downstream 36547 21108129 ~ 21160149 (+)
npm2b LOC106592477 coding downstream 205986 21277568 ~ 21288531 (+)
LOC110523406 crybb1 coding downstream 402271 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 407103 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 446975 21518557 ~ 21521828 (+)
G377261 NA non-coding upstream 27378 21043689 ~ 21043996 (+)
G377251 NA non-coding upstream 36858 21033942 ~ 21034516 (+)
G377243 NA non-coding upstream 46106 21024964 ~ 21025268 (+)
G377241 NA non-coding upstream 48005 21022705 ~ 21023369 (+)
G377240 NA non-coding upstream 51467 21019662 ~ 21019907 (+)
G377255 NA non-coding downstream 28749 21100331 ~ 21103100 (+)
G377292 NA non-coding downstream 41312 21112894 ~ 21125541 (+)
G377293 NA non-coding downstream 75749 21147331 ~ 21151990 (+)
G377294 NA non-coding downstream 80832 21152414 ~ 21153105 (+)
LOC110522817 LOC106568462 other upstream 234815 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 312873 20508074 ~ 20759255 (+)
G377022 NA other upstream 474511 20591480 ~ 20596863 (+)
G376320 NA other upstream 1087526 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 2988009 18067350 ~ 18177035 (+)
G378660 NA other downstream 1100953 22172535 ~ 22231920 (+)
G378832 NA other downstream 1432170 22503752 ~ 22506270 (+)
G378868 NA other downstream 1530528 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1870710 22942205 ~ 23007315 (+)

Expression



Co-expression Network