G377292


Basic Information

Item Value
gene id G377292
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21112894 ~ 21125541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU428844
tggatactggtcctctgtcagtggggttattactggatactggtcctctgtcagtcgggttgttctgggtactggtcctctgtcagtgaggttgatactggatactggtcctctgtcagtggggttattactggatactggtcctctgtcagtcgggttgttctgggtactggtcctctgtcagtgaggttgatactggatactggtcctctgtcagtgtggttgatactggatactggtcctctgtcagtcgggttgttctgggtactggtcctctgtcagtgaggttgatactggatactggtcctctgtcagtgtggttgatactggatactggtcctctgtcagtggggttgttactggatactggtcctctgtcagtcgggttgttactggatactcgtcctctgtcagtggggttgtta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU428844 True 425 lncRNA 0.51 2 21112894 21125541

Neighbor

gene id symbol gene type direction distance location
LOC110522819 LOC106568526 coding upstream 13605 21050936 ~ 21099289 (+)
LOC110523398 LOC100534606 coding upstream 121518 20952149 ~ 20991376 (+)
ccar2 LOC106568504 coding upstream 168851 20923014 ~ 20944043 (+)
LOC110523395 LOC106568500 coding upstream 202257 20898121 ~ 20910637 (+)
LOC110522818 LOC106568484 coding upstream 215027 20881938 ~ 20897867 (+)
npm2b LOC106592477 coding downstream 152027 21277568 ~ 21288531 (+)
LOC110523406 crybb1 coding downstream 348312 21473853 ~ 21477171 (+)
LOC110523407 LOC106568363 coding downstream 353144 21478685 ~ 21493435 (+)
LOC110523409 LOC106565015 coding downstream 393016 21518557 ~ 21521828 (+)
LOC110523408 LOC106565015 coding downstream 402014 21527555 ~ 21534161 (+)
G377255 NA non-coding upstream 9794 21100331 ~ 21103100 (+)
G377272 NA non-coding upstream 41312 21071374 ~ 21071582 (+)
G377261 NA non-coding upstream 68898 21043689 ~ 21043996 (+)
G377251 NA non-coding upstream 78378 21033942 ~ 21034516 (+)
G377243 NA non-coding upstream 87626 21024964 ~ 21025268 (+)
G377293 NA non-coding downstream 21790 21147331 ~ 21151990 (+)
G377294 NA non-coding downstream 26873 21152414 ~ 21153105 (+)
LOC110523400 LOC106568542 non-coding downstream 33590 21108129 ~ 21160149 (+)
G377299 NA non-coding downstream 35258 21160799 ~ 21161204 (+)
G377301 NA non-coding downstream 36913 21162454 ~ 21162971 (+)
LOC110522817 LOC106568462 other upstream 276335 20831111 ~ 20842676 (+)
LOC110522816 LOC106568602 other upstream 354393 20508074 ~ 20759255 (+)
G377022 NA other upstream 516031 20591480 ~ 20596863 (+)
G376320 NA other upstream 1129046 19983261 ~ 19983848 (+)
arhgef28a LOC106568988 other upstream 3029529 18067350 ~ 18177035 (+)
G378660 NA other downstream 1046994 22172535 ~ 22231920 (+)
G378832 NA other downstream 1378211 22503752 ~ 22506270 (+)
G378868 NA other downstream 1476569 22602110 ~ 22629669 (+)
lhfpl2a lhfpl2 other downstream 1816751 22942205 ~ 23007315 (+)
LOC110522832 LOC106567816 other downstream 2498423 23623921 ~ 23678038 (+)

Expression


Co-expression Network